PDB entry 2r1d

View 2r1d on RCSB PDB site
Description: Crystal structure of rat neurexin 1beta in the Ca2+ containing form
Class: cell adhesion, splicing
Keywords: beta-sandwich, CELL ADHESION, SPLICING
Deposited on 2007-08-22, released 2008-04-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1da1
  • Chain 'B':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1db1
  • Chain 'C':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1dc1
  • Chain 'D':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1dd1
  • Chain 'E':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1de1
  • Chain 'F':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1df1
  • Chain 'G':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1dg1
  • Chain 'H':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1dh1
  • Chain 'I':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r1di1
  • Chain 'W':
    Compound: Neurexin-1-beta
    Species: Rattus norvegicus [TaxId:10116]
    Gene: NRXN1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2r1dA (A:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dA (A:)
ghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyle
lhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypa
grqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlvge
vp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2r1dB (B:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dB (B:)
ghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyle
lhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypa
grqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlvge

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2r1dC (C:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dC (C:)
gghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyl
elhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvieryp
agrqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlvg
evp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2r1dD (D:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dD (D:)
ghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyle
lhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypa
grqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlvg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2r1dE (E:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dE (E:)
ghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyle
lhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypa
grqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlvge
vp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2r1dF (F:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dF (F:)
ghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyle
lhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypa
grqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlv

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2r1dG (G:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dG (G:)
ghagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdyle
lhihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypa
grqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrlvge
vp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2r1dH (H:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dH (H:)
hagttyifskgggqitykwppndrpstradrlaigfstvqkeavlvrvdsssglgdylel
hihqgkigvkfnvgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypag
rqltifnsqatiiiggkeqgqpfqgqlsglyynglkvlnmaaendaniaivgnvrl

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2r1dI (I:)
gsslgahhihhfhgsskhhsvpiaiyrspaslrgghagttyifskgggqitykwppndrp
stradrlaigfstvqkeavlvrvdsssglgdylelhihqgkigvkfnvgtddiaieesna
iindgkyhvvrftrsggnatlqvdswpvierypagrqltifnsqatiiiggkeqgqpfqg
qlsglyynglkvlnmaaendaniaivgnvrlvgevpssmttestat

    Sequence, based on observed residues (ATOM records): (download) 
    >2r1dI (I:)
ttyifsqitykwrpstradrlaigfstvqkeavlvrvdssslgdylelhihqgkigvkfn
vgtddiaieesnaiindgkyhvvrftrsggnatlqvdswpvierypaqltifnsqatiii
ggkeqgqpfqgqlsglyynglkvlnmanvrl

  • Chain 'W':
    No sequence available.