PDB entry 2r06

View 2r06 on RCSB PDB site
Description: structural analysis of antiviral agents that interact with the capsid of human rhinoviruses
Class: Virus
Keywords: RHINOVIRUS COAT PROTEIN, Icosahedral virus
Deposited on 1988-10-03, released 1990-01-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: human rhinovirus 14 coat protein (subunit vp1)
    Species: Human rhinovirus 14 [TaxId:12131]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r061_
  • Chain '2':
    Compound: human rhinovirus 14 coat protein (subunit vp2)
    Species: Human rhinovirus 14 [TaxId:12131]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03303 (Start-261)
      • conflict (169)
    Domains in SCOPe 2.08: d2r06.1
  • Chain '3':
    Compound: human rhinovirus 14 coat protein (subunit vp3)
    Species: Human rhinovirus 14 [TaxId:12131]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r063_
  • Chain '4':
    Compound: human rhinovirus 14 coat protein (subunit vp4)
    Species: Human rhinovirus 14 [TaxId:12131]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2r06.1
  • Heterogens: W35, HOH

PDB Chain Sequences:

  • Chain '1':
    Sequence, based on SEQRES records: (download) 
    >2r061 (1:)
glgdeleevivektkqtvasissgpkhtqkvpiltanetgatmpvlpsdsietrttymhf
ngsetdvecflgraacvhvteiqnkdatgidnhreaklfndwkinlsslvqlrkklelft
yvrfdseytilatasqpdsanyssnlvvqamyvppgapnpkewddytwqsasnpsvffkv
gdtsrfsvpyvglasayncfydgyshddaetqygitvlnhmgsmafrivnehdehktlvk
irvyhrakhveawiprapralpytsigrtnypkntepvikkrkgdiksy

    Sequence, based on observed residues (ATOM records): (download) 
    >2r061 (1:)
tvasissgpkhtqkvpiltanetgatmpvlpsdsietrttymhfngsetdvecflgraac
vhvteiqnkdatgidnhreaklfndwkinlsslvqlrkklelftyvrfdseytilatasq
pdsanyssnlvvqamyvppgapnpkewddytwqsasnpsvffkvgdtsrfsvpyvglasa
yncfydgyshddaetqygitvlnhmgsmafrivnehdehktlvkirvyhrakhveawipr
apralpytsigrtnypkntepvikkrkgdiksy

  • Chain '2':
    Sequence, based on SEQRES records: (download) 
    >2r062 (2:)
spnveacgysdrvqqitlgnstittqeaanavvcyaewpeylpdvdasdvnktskpdtsv
crfytldsktwttgskgwcwklpdalkdmgvfgqnmffhslgrsgytvhvqcnatkfhsg
cllvvvipehqlasheggnvsvkytfthpgergidlssanevggpvkdvlynmngtllgn
llifphqfinlrtnntativipyinsvpidsmtrhnnvslmvipiapltvptgatpslpi
tvtiapmctefsgirsksivpq

    Sequence, based on observed residues (ATOM records): (download) 
    >2r062 (2:)
gysdrvqqitlgnstittqeaanavvcyaewpeylpdvdasdvnktskpdtsvcrfytld
sktwttgskgwcwklpdalkdmgvfgqnmffhslgrsgytvhvqcnatkfhsgcllvvvi
pehqlasheggnvsvkytfthpgergidlssanevggpvkdvlynmngtllgnllifphq
finlrtnntativipyinsvpidsmtrhnnvslmvipiapltvptgatpslpitvtiapm
ctefsgirsksivpq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2r063 (3:)
glptttlpgsgqflttddrqspsalpnyeptprihipgkvhnlleiiqvdtlipmnntht
kdevnsyliplnanrqneqvfgtnlfigdgvfkttllgeivqyythwsgslrfslmytgp
alssaklilaytppgargpqdrreamlgthvvwdiglqstivmtipwtsgvqfrytdpdt
ytsagflscwyqtslilppettgqvyllsfisacpdfklrlmkdtqtisqtvalte

  • Chain '4':
    Sequence, based on SEQRES records: (download) 
    >2r064 (4:)
gaqvstqksgshenqniltngsnqtftvinyykdaastssagqslsmdpskftepvkdlm
lkgapaln

    Sequence, based on observed residues (ATOM records): (download) 
    >2r064 (4:)
inyykdaastssagqslsmdpskftepvkdlmlkgapaln