PDB entry 2qyv

View 2qyv on RCSB PDB site
Description: crystal structure of putative xaa-his dipeptidase (yp_718209.1) from haemophilus somnus 129pt at 2.11 a resolution
Deposited on 2007-08-15, released 2007-08-28
The last revision was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.11 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Xaa-His dipeptidase
    Species: Histophilus somni [TaxId:205914]
    Gene: pepD, HS_0004
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Xaa-His dipeptidase
    Species: Histophilus somni [TaxId:205914]
    Gene: pepD, HS_0004
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, SO4, GOL, IPA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2qyvA (A:)
gmsdlqslqpkllwqwfdqicaiphpsykeeqlaqfiinwaktkgffaerdevgnvlirk
patvgmenrkpvvlqahldmvpqanegtnhnfdqdpilpyidgdwvkakgttlgadngig
masalavlesndiahpelevlltmteergmegaiglrpnwlrseilintdteengeiyig
caggenadlelpieyqvnnfehcyqvvlkglrgghsgvdihtgranaikvllrflaelqq
nqphfdftlanirggsirnaipresvatlvfngditvlqsavqkfadvikaelaltepnl
iftlekvekpqqvfssqctkniihclnvlpngvvrnsdvienvvetslsigvlktednfv
rstmlvrsliesgksyvasllkslaslaqgninlsgdypgwepqshsdildltktiyaqv
lgtdpeikvihaglecgllkkiyptidmvsigptirnahspdekvhipavetywkvltgi
lahipsr

    Sequence, based on observed residues (ATOM records):
    >2qyvA (A:)
qslqpkllwqwfdqicaiphpsykeeqlaqfiinwaktkgffaerdevgnvlirkpatvg
menrkpvvlqahldmvpqqdpilpyidgdwvkakgttlgadngigmasalavlesndiah
pelevlltmteergmegaiglrpnwlrseilintdteengeiyigcaggenadlelpiey
qvnnfehcyqvvlkglrgghsgvdihtgranaikvllrflaelqqnqphfdftlanirgg
sirnaipresvatlvfngditvlqsavqkfadvikaelaltepnliftlekvekpqqvfs
sqctkniihclnvlpngvvrnsdvienvvetslsigvlktednfvrstmlvrsliesgks
yvasllkslaslaqgninlsgdypgwepqshsdildltktiyaqvlgtdpeikvihagle
cgllkkiyptidmvsigptirnahspdekvhipavetywkvltgilahipsr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2qyvB (B:)
gmsdlqslqpkllwqwfdqicaiphpsykeeqlaqfiinwaktkgffaerdevgnvlirk
patvgmenrkpvvlqahldmvpqanegtnhnfdqdpilpyidgdwvkakgttlgadngig
masalavlesndiahpelevlltmteergmegaiglrpnwlrseilintdteengeiyig
caggenadlelpieyqvnnfehcyqvvlkglrgghsgvdihtgranaikvllrflaelqq
nqphfdftlanirggsirnaipresvatlvfngditvlqsavqkfadvikaelaltepnl
iftlekvekpqqvfssqctkniihclnvlpngvvrnsdvienvvetslsigvlktednfv
rstmlvrsliesgksyvasllkslaslaqgninlsgdypgwepqshsdildltktiyaqv
lgtdpeikvihaglecgllkkiyptidmvsigptirnahspdekvhipavetywkvltgi
lahipsr

    Sequence, based on observed residues (ATOM records):
    >2qyvB (B:)
lqpkllwqwfdqicaiphpsykeeqlaqfiinwaktkgffaerdevgnvlirkpatvgme
nrkpvvlqahldmvpqqdpilpyidgdwvkakgttlgadngigmasalavlesndiahpe
levlltmteergmegaiglrpnwlrseilintdteengeiyigcaggenadlelpieyqv
nnfehcyqvvlkglrgghsgvdihtgranaikvllrflaelqqnqphfdftlanirggsi
rnaipresvatlvfngditvlqsavqkfadvikaelaltepnliftlekvekpqqvfssq
ctkniihclnvlpngvvrnsdvienvvetslsigvlktednfvrstmlvrsliesgksyv
asllkslaslaqgninlsgdypgwepqshsdildltktiyaqvlgtdpeikvihaglecg
llkkiyptidmvsigptirnahspdekvhipavetywkvltgilahipsr