PDB entry 2qye

View 2qye on RCSB PDB site
Description: Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM
Deposited on 2007-08-14, released 2007-08-21
The last revision was dated 2007-10-09, with a file datestamp of 2007-10-05.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.196
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-End)
      • expression tag (1-2)
  • Chain 'B':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-End)
      • expression tag (1-2)
  • Chain 'C':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-End)
      • expression tag (1-2)
  • Chain 'D':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-End)
      • expression tag (1-2)
  • Chain 'E':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-370)
      • expression tag (1-2)
      • expression tag (371-372)
  • Chain 'F':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-End)
      • expression tag (1-2)
  • Chain 'G':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-370)
      • expression tag (1-2)
  • Chain 'H':
    Compound: Mandelate racemase/muconate lactonizing enzyme, putative
    Species: Roseovarius nubinhibens ISM
    Gene: ISM_14070
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF8 (3-End)
      • expression tag (1-2)
  • Heterogens: MG, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2qyeA (A:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeA (A:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrira
clpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmk
ldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggei
asaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnsl
gapvadwal

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2qyeB (B:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeB (B:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrira
clpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmk
ldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggei
asaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnsl
gapvadwal

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2qyeC (C:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeC (C:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrira
clpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmk
ldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggei
asaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnsl
gapvadwal

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2qyeD (D:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeD (D:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrira
clpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmk
ldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggei
asaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnsl
gapvadwal

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2qyeE (E:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeE (E:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqaetraelarhraagyrqfqikvgadwqsdidriraclp
llepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmklde
cvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggeiasa
avahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnslgap
vadwalpeg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2qyeF (F:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeF (F:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrira
clpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmk
ldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggei
asaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnsl
gapvadwal

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2qyeG (G:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeG (G:)
slritrirlyktdlpyvdgtvarasvvvidtdaglqgcgeftpcgenymiahsegvdafa
rlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgqpvwmllggkl
cdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidriraclpllepgek
amadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmkldecvtglhm
aqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggeiasaavahfaa
stpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnslgapvadwalp

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2qyeH (H:)
mslritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenym
iahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatg
qpvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrir
aclpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpm
kldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswgge
iasaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfns
lgapvadwalpeghhhhhh

    Sequence, based on observed residues (ATOM records):
    >2qyeH (H:)
slritrirlyktdlpyvdgsygwgagnaitvarasvvvidtdaglqgcgeftpcgenymi
ahsegvdafarlaapqllgqdprqvarmerlmdhlvqghgyakapfdaafwdilgqatgq
pvwmllggklcdgapmyrvapqrseaetraelarhraagyrqfqikvgadwqsdidrira
clpllepgekamadanqgwrvdnairlaratrdldyileqpcrsyeecqqvrrvadqpmk
ldecvtglhmaqrivadrgaeicclkisnlgglskarrtrdflidnrmpvvaedswggei
asaavahfaastpeeflinstdlmnyntrstglggptvhqgrlyasdtpglgvtpdfnsl
gapvadwal