PDB entry 2qqr

View 2qqr on RCSB PDB site
Description: JMJD2A hybrid tudor domains
Class: oxidoreductase
Keywords: HISTONE LYSINE DEMETHYLASE, TANDEM HYBRID TUDOR DOMAINS, METAL BINDING PROTEIN, Chromatin regulator, Dioxygenase, Host-virus interaction, Iron, Metal-binding, Nucleus, Oxidoreductase, Phosphorylation, Polymorphism, Transcription, Transcription regulation, Zinc, Zinc-finger
Deposited on 2007-07-26, released 2007-12-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.184
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: JmjC domain-containing histone demethylation protein 3A
    Species: Homo sapiens [TaxId:9606]
    Gene: JMJD2A, JHDM3A, JMJD2, KIAA0677
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75164 (3-117)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d2qqra1, d2qqra2, d2qqra3
  • Chain 'B':
    Compound: JmjC domain-containing histone demethylation protein 3A
    Species: Homo sapiens [TaxId:9606]
    Gene: JMJD2A, JHDM3A, JMJD2, KIAA0677
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75164 (3-117)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d2qqrb1, d2qqrb2, d2qqrb3
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2qqrA (A:)
ghmqsitagqkviskhkngrfyqcevvrlttetfyevnfddgsfsdnlypedivsqdclq
fgppaegevvqvrwtdgqvygakfvashpiqmyqvefedgsqlvvkrddvytldeelp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2qqrB (B:)
ghmqsitagqkviskhkngrfyqcevvrlttetfyevnfddgsfsdnlypedivsqdclq
fgppaegevvqvrwtdgqvygakfvashpiqmyqvefedgsqlvvkrddvytldeelp