PDB entry 2qid

View 2qid on RCSB PDB site
Description: Dengue Virus NS3-Protease Complexed with Mung-Bean Bowman-Birk Inhibitor
Class: viral protein/inhibitor
Keywords: BETA BARRELS, CATALYTIC TRIAD, INHIBITOR COMPLEX, MULTIPLE CONFORMATION, VIRUS/VIRAL PROTEIN/INHIBITOR, VIRAL PROTEIN-INHIBITOR complex
Deposited on 2007-07-03, released 2007-08-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-04-25, with a file datestamp of 2012-04-20.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.199
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Non-structural protein 1 (NS1)
    Species: Dengue virus [TaxId:12637]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14340
      • conflict (82)
      • conflict (84)
      • conflict (154)
    Domains in SCOPe 2.08: d2qida_
  • Chain 'B':
    Compound: Non-structural protein 1 (NS1)
    Species: Dengue virus [TaxId:12637]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14340
      • conflict (82)
      • conflict (84)
      • conflict (154)
    Domains in SCOPe 2.08: d2qidb_
  • Chain 'C':
    Compound: Bowman-Birk type trypsin inhibitor
    Species: Vigna radiata var. radiata [TaxId:3916]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01062 (0-71)
      • conflict (24)
    Domains in SCOPe 2.08: d2qidc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2qidA (A:)
hhhhhhagvlwdvpspppvgkaeledgayrikqkgilgysqigagvykegtfhtmwhvtr
gavlmhkgkriepswadvkkdlvscgggwklegewkegeevqvlalepgknpravqtkpg
lfktnagtigavsldfspgtsgspiidkkgkvvgiygngvvtrsgayvsaiaqteksied
npeieddifrk

    Sequence, based on observed residues (ATOM records): (download) 
    >2qidA (A:)
wdvpspppvgkaeledgayrikqkgilgysqigagvykegtfhtmwhvtrgavlmhkgkr
iepswadvkkdlvscgggwklegewkegeevqvlalepgknpravqtkpglfktnagtig
avsldfspgtsgspiidkkgkvvgiygngvvtrsgayvsaiaqteksiednpeiedd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2qidB (B:)
hhhhhhagvlwdvpspppvgkaeledgayrikqkgilgysqigagvykegtfhtmwhvtr
gavlmhkgkriepswadvkkdlvscgggwklegewkegeevqvlalepgknpravqtkpg
lfktnagtigavsldfspgtsgspiidkkgkvvgiygngvvtrsgayvsaiaqteksied
npeieddifrk

    Sequence, based on observed residues (ATOM records): (download) 
    >2qidB (B:)
wdvpspppvgkaeledgayrikqkgilgysqigagvykegtfhtmwhvtrgavlmhkgkr
iepswadvkkdlvscgggwklegewkegeevqvlalepgknpravqtkpglfktnagtig
avsldfspgtsgspiidkkgkvvgiygngvvtrsgayvsaiaqteksiednpeiedd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2qidC (C:)
shdepsessepccdscdctksippqchcanirlnschsackscictrsmpgkcrcldtdd
fcykpcesmdkd