PDB entry 2qdd

View 2qdd on RCSB PDB site
Description: Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM
Class: structural genomics, unknown function
Keywords: ENOLASE, RACEMASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NYSGRC, NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, New York SGX Research Center for Structural Genomics, NYSGXRC, UNKNOWN FUNCTION
Deposited on 2007-06-20, released 2007-06-26
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.184
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: Roseovarius nubinhibens [TaxId:89187]
    Gene: COG4948, ISM_14065
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF7 (3-369)
      • cloning artifact (1-2)
      • cloning artifact (370)
    Domains in SCOPe 2.03: d2qdda1, d2qdda2
  • Chain 'B':
    Compound: Mandelate racemase/muconate lactonizing enzyme
    Species: Roseovarius nubinhibens [TaxId:89187]
    Gene: COG4948, ISM_14065
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3SNF7 (3-369)
      • cloning artifact (1-2)
      • cloning artifact (370-377)
    Domains in SCOPe 2.03: d2qddb1, d2qddb2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2qddA (A:)
mslritrltvfhldlplakpywlsggrlkfdrldstylridtdegvtgwgegcpwghsyl
pahgpglragiatlaphllgldprsldhvnrvmdlqlpghsyvkspidmacwdilgqvag
lplwqllggeaatpvpinssistgtpdqmlgliaeaaaqgyrthsakiggsdpaqdiari
eaisaglpdghrvtfdvnrawtpaiavevlnsvrardwieqpcqtldqcahvarrvanpi
mldeclhefsdhlaawsrgacegvkikpnrvggltrarqirdfgvsvgwqmhiedvggta
ladtaalhlaastpeanrlaswlghahladdpipgqgarnrdglatppsapglgvipdpe
algrpvasydeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2qddA (A:)
slritrltvfhldlplakpywlsglkfdrldstylridtdegvtgwgegcpwghsylpah
gpglragiatlaphllgldprsldhvnrvmdlqlpghsyvkspidmacwdilgqvaglpl
wqllggeaatpvpinssistgtpdqmlgliaeaaaqgyrthsakiggsdpaqdiarieai
saglpdghrvtfdvnrawtpaiavevlnsvrardwieqpcqtldqcahvarrvanpimld
eclhefsdhlaawsrgacegvkikpnrvggltrarqirdfgvsvgwqmhiedvggtalad
taalhlaastpeanrlaswlghahladdpipgqgarnrdglatppsapglgvipdpealg
rpvasyde

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2qddB (B:)
mslritrltvfhldlplakpywlsggrlkfdrldstylridtdegvtgwgegcpwghsyl
pahgpglragiatlaphllgldprsldhvnrvmdlqlpghsyvkspidmacwdilgqvag
lplwqllggeaatpvpinssistgtpdqmlgliaeaaaqgyrthsakiggsdpaqdiari
eaisaglpdghrvtfdvnrawtpaiavevlnsvrardwieqpcqtldqcahvarrvanpi
mldeclhefsdhlaawsrgacegvkikpnrvggltrarqirdfgvsvgwqmhiedvggta
ladtaalhlaastpeanrlaswlghahladdpipgqgarnrdglatppsapglgvipdpe
algrpvasydeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2qddB (B:)
slritrltvfhldlplakpfdrldstylridtdegvtgwgegcpwghsylpahgpglrag
iatlaphllgldprsldhvnrvmdlqlpghsyvkspidmacwdilgqvaglplwqllgge
aatpvpinssistgtpdqmlgliaeaaaqgyrthsakiggsdpaqdiarieaisaglpdg
hrvtfdvnrawtpaiavevlnsvrardwieqpcqtldqcahvarrvanpimldeclhefs
dhlaawsrgacegvkikpnrvggltrarqirdfgvsvgwqmhiedvggtaladtaalhla
astpeanrlaswlghahladdpipgqgarnrdglatppsapglgvipdpealgrpvasyd
eghhhhhh