PDB entry 2pzl

View 2pzl on RCSB PDB site
Description: Crystal structure of the Bordetella bronchiseptica enzyme WbmG in complex with NAD and UDP
Class: Sugar Binding Protein
Keywords: ROSSMANN FOLD, PROTEIN-NAD COMPLEX, PROTEIN-NUCLEOTIDE COMPLEX, Sugar Binding Protein
Deposited on 2007-05-18, released 2007-10-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 2.39 Å
R-factor: 0.189
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.15, wbmG
    Database cross-references and differences (RAF-indexed):
    • Uniprot O87988 (20-End)
      • expression tag (18-19)
    Domains in SCOPe 2.07: d2pzla1, d2pzla2
  • Chain 'B':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.15, wbmG
    Database cross-references and differences (RAF-indexed):
    • Uniprot O87988 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.07: d2pzlb1, d2pzlb2
  • Heterogens: NAD, UDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2pzlA (A:)
mgsshhhhhhssglvprgshmrilitggagclgsnliehwlpqgheilvidnfatgkrev
lppvaglsviegsvtdagllerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinva
kaaskagvkrllnfqtalcygrpatvpipidsptapftsygisktageaflmmsdvpvvs
lrlanvtgprlaigpiptfykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgv
fnvstgeghsikevfdvvldyvgatlaepvpvvapgaddvpsvvldpsktetefgwkakv
dfkdtitgqlawydkygvtdifshlsapkt

    Sequence, based on observed residues (ATOM records): (download) 
    >2pzlA (A:)
shmrilitggagclgsnliehwlpqgheilvidnfatgkrevlppvaglsviegsvtdag
llerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinvakaaskagvkrllnfqtal
cygrpatvpipidsptapftsygisktageaflmmsdvpvvslrlanvtgprlaigpipt
fykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgvfnvstgeghsikevfdvv
ldyvgatlaepvpvvapgaddvpsvvldpsktetefgwkakvdfkdtitgqlawydkygv
tdifshlsap

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2pzlB (B:)
mgsshhhhhhssglvprgshmrilitggagclgsnliehwlpqgheilvidnfatgkrev
lppvaglsviegsvtdagllerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinva
kaaskagvkrllnfqtalcygrpatvpipidsptapftsygisktageaflmmsdvpvvs
lrlanvtgprlaigpiptfykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgv
fnvstgeghsikevfdvvldyvgatlaepvpvvapgaddvpsvvldpsktetefgwkakv
dfkdtitgqlawydkygvtdifshlsapkt

    Sequence, based on observed residues (ATOM records): (download) 
    >2pzlB (B:)
lvprgshmrilitggagclgsnliehwlpqgheilvidnfatgkrevlppvaglsviegs
vtdagllerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinvakaaskagvkrlln
fqtalcygrpatvpipidsptapftsygisktageaflmmsdvpvvslrlanvtgprlai
gpiptfykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgvfnvstgeghsike
vfdvvldyvgapvpvvapgaddvpsvvldpsktetefgwkakvdfkdtitgqlawydkyg
vtdifshls