PDB entry 2pzk

View 2pzk on RCSB PDB site
Description: Crystal structure of the Bordetella bronchiseptica enzyme WbmG in complex with NAD
Class: sugar binding protein
Keywords: rossmann fold, protein-nad complex, sugar binding protein
Deposited on 2007-05-18, released 2007-10-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.188
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.15, wbmG
    Database cross-references and differences (RAF-indexed):
    • Uniprot O87988 (20-End)
      • expression tag (18-19)
    Domains in SCOPe 2.08: d2pzka1, d2pzka2
  • Chain 'B':
    Compound: Putative nucleotide sugar epimerase/ dehydratase
    Species: Bordetella bronchiseptica [TaxId:518]
    Gene: BbLPS1.15, wbmG
    Database cross-references and differences (RAF-indexed):
    • Uniprot O87988 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.08: d2pzkb1, d2pzkb2
  • Heterogens: MG, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2pzkA (A:)
mgsshhhhhhssglvprgshmrilitggagclgsnliehwlpqgheilvidnfatgkrev
lppvaglsviegsvtdagllerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinva
kaaskagvkrllnfqtalcygrpatvpipidsptapftsygisktageaflmmsdvpvvs
lrlanvtgprlaigpiptfykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgv
fnvstgeghsikevfdvvldyvgatlaepvpvvapgaddvpsvvldpsktetefgwkakv
dfkdtitgqlawydkygvtdifshlsapkt

    Sequence, based on observed residues (ATOM records): (download) 
    >2pzkA (A:)
shmrilitggagclgsnliehwlpqgheilvidnfatgkrevlppvaglsviegsvtdag
llerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinvakaaskagvkrllnfqtal
cygrpatvpipidsptapftsygisktageaflmmsdvpvvslrlanvtgprlaigpipt
fykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgvfnvstgeghsikevfdvv
ldyvgatlaepvpvvapgaddvpsvvldpsktetefgwkakvdfkdtitgqlawydkygv
tdifshlsap

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2pzkB (B:)
mgsshhhhhhssglvprgshmrilitggagclgsnliehwlpqgheilvidnfatgkrev
lppvaglsviegsvtdagllerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinva
kaaskagvkrllnfqtalcygrpatvpipidsptapftsygisktageaflmmsdvpvvs
lrlanvtgprlaigpiptfykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgv
fnvstgeghsikevfdvvldyvgatlaepvpvvapgaddvpsvvldpsktetefgwkakv
dfkdtitgqlawydkygvtdifshlsapkt

    Sequence, based on observed residues (ATOM records): (download) 
    >2pzkB (B:)
lvprgshmrilitggagclgsnliehwlpqgheilvidnfatgkrevlppvaglsviegs
vtdagllerafdsfkpthvvhsaaaykdpddwaedaatnvqgsinvakaaskagvkrlln
fqtalcygrpatvpipidsptapftsygisktageaflmmsdvpvvslrlanvtgprlai
gpiptfykrlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgvfnvstgeghsike
vfdvvldyvgaepvpvvapgaddvpsvvldpsktetefgwkakvdfkdtitgqlawydky
gvtdifshls