PDB entry 2pyq
View 2pyq on RCSB PDB site
Description: Crystal structure of a duf2853 member protein (jann_4075) from jannaschia sp. ccs1 at 1.500 A resolution
Class: unknown function
Keywords: Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function
Deposited on
2007-05-16, released
2007-05-29
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-10-18, with a file datestamp of
2017-10-13.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Uncharacterized protein
Species: Jannaschia sp. CCS1 [TaxId:290400]
Gene: YP_512017.1, Jann_4075
Database cross-references and differences (RAF-indexed):
- Uniprot Q28JX0 (1-113)
- leader sequence (0)
- modified residue (1)
- modified residue (21)
- modified residue (25)
- modified residue (64)
- modified residue (76)
- modified residue (101)
Domains in SCOPe 2.08: d2pyqa1, d2pyqa2 - Chain 'B':
Compound: Uncharacterized protein
Species: Jannaschia sp. CCS1 [TaxId:290400]
Gene: YP_512017.1, Jann_4075
Database cross-references and differences (RAF-indexed):
- Uniprot Q28JX0 (1-113)
- leader sequence (0)
- modified residue (1)
- modified residue (21)
- modified residue (25)
- modified residue (64)
- modified residue (76)
- modified residue (101)
Domains in SCOPe 2.08: d2pyqb2, d2pyqb3 - Chain 'C':
Compound: Uncharacterized protein
Species: Jannaschia sp. CCS1 [TaxId:290400]
Gene: YP_512017.1, Jann_4075
Database cross-references and differences (RAF-indexed):
- Uniprot Q28JX0 (1-113)
- leader sequence (0)
- modified residue (1)
- modified residue (21)
- modified residue (25)
- modified residue (64)
- modified residue (76)
- modified residue (101)
Domains in SCOPe 2.08: d2pyqc2, d2pyqc3 - Chain 'D':
Compound: Uncharacterized protein
Species: Jannaschia sp. CCS1 [TaxId:290400]
Gene: YP_512017.1, Jann_4075
Database cross-references and differences (RAF-indexed):
- Uniprot Q28JX0 (1-113)
- leader sequence (0)
- modified residue (1)
- modified residue (21)
- modified residue (25)
- modified residue (64)
- modified residue (76)
- modified residue (101)
Domains in SCOPe 2.08: d2pyqd2, d2pyqd3 - Heterogens: PG4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2pyqA (A:)
gmgkrddliaqyaddlrnkcgmepdmallekvtkgcgpaiynrdastvagsdtaeletik
knflmkklgladseslmggiqsvietygrsernkyravvyymltkhfgkesvyg
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2pyqB (B:)
gmgkrddliaqyaddlrnkcgmepdmallekvtkgcgpaiynrdastvagsdtaeletik
knflmkklgladseslmggiqsvietygrsernkyravvyymltkhfgkesvyg
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2pyqC (C:)
gmgkrddliaqyaddlrnkcgmepdmallekvtkgcgpaiynrdastvagsdtaeletik
knflmkklgladseslmggiqsvietygrsernkyravvyymltkhfgkesvyg
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2pyqD (D:)
gmgkrddliaqyaddlrnkcgmepdmallekvtkgcgpaiynrdastvagsdtaeletik
knflmkklgladseslmggiqsvietygrsernkyravvyymltkhfgkesvyg