PDB entry 2pyo
View 2pyo on RCSB PDB site
Description: Drosophila nucleosome core
Class: Structural protein/DNA
Keywords: Nucleosome core, histone fold, Structural protein/DNA COMPLEX
Deposited on
2007-05-16, released
2007-11-06
The last revision prior to the SCOP 1.75 freeze date was dated
2008-03-04, with a file datestamp of
2008-02-29.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: 0.229
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: histone h3
Species: Drosophila melanogaster
Gene: His3
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2pyoa1 - Chain 'B':
Compound: histone h4
Species: Drosophila melanogaster
Gene: His4, H4
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2pyob1 - Chain 'C':
Compound: histone h2a
Species: Drosophila melanogaster
Gene: His2A, H2a
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: histone h2b
Species: Drosophila melanogaster
Gene: His2B
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: histone h3
Species: Drosophila melanogaster
Gene: His3
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2pyoe1 - Chain 'F':
Compound: histone h4
Species: Drosophila melanogaster
Gene: His4, H4
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2pyof1 - Chain 'G':
Compound: histone h2a
Species: Drosophila melanogaster
Gene: His2A, H2a
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: histone h2b
Species: Drosophila melanogaster
Gene: His2B
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: DNA (147-mer)
Species: HOMO SAPIENS
- Chain 'J':
Compound: DNA (147-mer)
Species: HOMO SAPIENS
- Heterogens: MN, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2pyoA (A:)
artkqtarkstggkaprkqlatkaarksapatggvkkphryrpgtvalreirryqkstel
lirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtim
pkdiqlarrirgera
Sequence, based on observed residues (ATOM records): (download)
>2pyoA (A:)
kphryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeas
eaylvglfedtnlcaihakrvtimpkdiqlarrirgera
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2pyoB (B:)
tgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkv
flenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg
Sequence, based on observed residues (ATOM records): (download)
>2pyoB (B:)
rdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvt
amdvvyalkrqgrtlygfgg
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2pyoE (E:)
artkqtarkstggkaprkqlatkaarksapatggvkkphryrpgtvalreirryqkstel
lirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvtim
pkdiqlarrirgera
Sequence, based on observed residues (ATOM records): (download)
>2pyoE (E:)
kphryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeas
eaylvglfedtnlcaihakrvtimpkdiqlarrirgera
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2pyoF (F:)
tgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkv
flenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg
Sequence, based on observed residues (ATOM records): (download)
>2pyoF (F:)
akrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtyte
hakrktvtamdvvyalkrqgrtlygfgg
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.