PDB entry 2pup

View 2pup on RCSB PDB site
Description: Structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding
Class: transferase
Keywords: 5-methylthioribose kinase, methionine recycling pathway, phosphate, TRANSFERASE
Deposited on 2007-05-09, released 2007-05-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.214
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methylthioribose kinase
    Species: Bacillus subtilis [TaxId:1423]
    Gene: mtnK, ykrT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2pupa_
  • Chain 'B':
    Compound: Methylthioribose kinase
    Species: Bacillus subtilis [TaxId:1423]
    Gene: mtnK, ykrT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2pupb_
  • Heterogens: MG, PO4, CPS, ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2pupA (A:)
mgvtktplyetlnessavalavklglfpskstltcqeigdgnlnyvfhiydqehdralii
kqavpyakvvgeswpltidrariessalirqgehvphlvprvfysdtemavtvmedlshl
kiarkgliegenyphlsqhigeflgktlfyssdyalepkvkkqlvkqftnpelcditerl
vftdpffdhdtndfeeelrpfveklwnndsvkieaaklkksfltsaetlihgdlhtgsif
asehetkvidpefafygpigfdvgqfianlflnalsrdgadreplyehvnqvwetfeetf
seawqkdsldvyanidgyltdtlshifeeaigfagcelirrtiglahvadldtivpfdkr
igrkrlaletgtafiekrsefktitdvielfkllvke

    Sequence, based on observed residues (ATOM records): (download) 
    >2pupA (A:)
plyetlnessavlavklltcqeigdgnlnyvfhiydqdraliikqavpypltidraries
salirqgehvphlvprvfysdtemavtvmedlshlkiarkgliegenyphlsqhigeflg
ktlfyssdyalepkvkkqlvkqftnpelcditerlvftdpffdhdtndfeeelrpfvekl
wnndsvkieaaklkksfltsaetlihgdlhtgsifasehetkvidpefafygpigfdvgq
fianlflnalsrdgadreplyehvnqvwetfeetfseawqkdsldvyanidgyltdtlsh
ifeeaigfagcelirrtiglahvadldtivpfdkrigrkrlaletgtafiekrsefktit
dvielfkllvk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2pupB (B:)
mgvtktplyetlnessavalavklglfpskstltcqeigdgnlnyvfhiydqehdralii
kqavpyakvvgeswpltidrariessalirqgehvphlvprvfysdtemavtvmedlshl
kiarkgliegenyphlsqhigeflgktlfyssdyalepkvkkqlvkqftnpelcditerl
vftdpffdhdtndfeeelrpfveklwnndsvkieaaklkksfltsaetlihgdlhtgsif
asehetkvidpefafygpigfdvgqfianlflnalsrdgadreplyehvnqvwetfeetf
seawqkdsldvyanidgyltdtlshifeeaigfagcelirrtiglahvadldtivpfdkr
igrkrlaletgtafiekrsefktitdvielfkllvke

    Sequence, based on observed residues (ATOM records): (download) 
    >2pupB (B:)
yetlnessavalavklgltltcqeigdnyvfhiydqeraliikqavpwpltidrariess
alirqgehvphlvprvfysdtemavtvmedlshlkiarkgliegenyphlsqhigeflgk
tlfyssdyalepkvkkqlvkqftnpelcditerlvftdpffdhdtndfeeelrpfveklw
nndsvkieaaklkksfltsaetlihgdlhtgsifasehetkvidpefafygpigfdvgqf
ianlflnalsrdgadreplyehvnqvwetfeetfseawqkdsldvyanidgyltdtlshi
feeaigfagcelirrtiglahvadldtivpfdkrigrkrlaletgtafiekrsefktitd
vielfkllvk