PDB entry 2plv

View 2plv on RCSB PDB site
Description: structural factors that control conformational transitions and serotype specificity in type 3 poliovirus
Class: virus
Keywords: PICORNAVIRUS, Icosahedral virus, Virus
Deposited on 1989-10-17, released 1989-10-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-29, with a file datestamp of 2017-11-24.
Experiment type: XRAY
Resolution: 2.88 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: human poliovirus type 1 (subunit vp1)
    Species: Human poliovirus 1 [TaxId:12081]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03300 (Start-301)
      • conflict (14)
    Domains in SCOPe 2.07: d2plv1_
  • Chain '2':
    Compound: human poliovirus type 1 (subunit vp2)
    Species: Human poliovirus 1 [TaxId:12081]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03300 (Start-271)
      • conflict (8)
    Domains in SCOPe 2.07: d2plv.1
  • Chain '3':
    Compound: human poliovirus type 1 (subunit vp3)
    Species: Human poliovirus 1 [TaxId:12081]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03300 (0-End)
      • conflict (122)
    Domains in SCOPe 2.07: d2plv3_
  • Chain '4':
    Compound: human poliovirus type 1 (subunit vp4)
    Species: Human poliovirus 1 [TaxId:12081]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2plv.1
  • Heterogens: SPH, MYR, HOH

PDB Chain Sequences:

  • Chain '1':
    Sequence, based on SEQRES records: (download) 
    >2plv1 (1:)
glgqmlesmidntvsstvgaatsrdalpnteasgpthskeipaltavetgatnplvpsdt
vqtrhvvqhrsrsessiesffargacvtimtvdnpasttnkdklfavwkitykdtvqlrr
klefftysrfdmeltfvvtanftetnnghalnqvyqimyvppgapvpekwddytwqtssn
psifytygtaparisvpyvgisnayshfydgfskvplkdqsaalgdslygaaslndfgil
avrvvndhnptkvtskirvylkpkhirvwcprppravayygpgvdykdgtltplstkdlt
ty

    Sequence, based on observed residues (ATOM records): (download) 
    >2plv1 (1:)
gssstaatsrdalpnteasgpthskeipaltavetgatnplvpsdtvqtrhvvqhrsrse
ssiesffargacvtimtvdnpasttnkdklfavwkitykdtvqlrrklefftysrfdmel
tfvvtanftetnnghalnqvyqimyvppgapvpekwddytwqtssnpsifytygtapari
svpyvgisnayshfydgfskvplkdqsaalgdslygaaslndfgilavrvvndhnptkvt
skirvylkpkhirvwcprppravayygpgvdykdgtltplstkdltty

  • Chain '2':
    Sequence, based on SEQRES records: (download) 
    >2plv2 (2:)
spnieacgysdrvlqltlgnstittqeaansvvaygrwpeylrdseanpvdqptepdvaa
crfytldtvswtkesrgwwwklpdalrdmglfgqnmyyhylgrsgytvhvqcnaskfhqg
algvfavpemclagdsntttmhtsyqnanpgekggtftgtftpdnnqtsparrfcpvdyl
lgngtllgnafvfphqiinlrtnncatlvlpyvnslsidsmvkhnnwgiailplaplnfa
sesspeipitltiapmccefnglrnitlprlq

    Sequence, based on observed residues (ATOM records): (download) 
    >2plv2 (2:)
eacgysdrvlqltlgnstittqeaansvvaygrwpeylrdseanpvdqptepdvaacrfy
tldtvswtkesrgwwwklpdalrdmglfgqnmyyhylgrsgytvhvqcnaskfhqgalgv
favpemclagdsntttmhtsyqnanpgekggtftgtftpdnnqtsparrfcpvdyllgng
tllgnafvfphqiinlrtnncatlvlpyvnslsidsmvkhnnwgiailplaplnfasess
peipitltiapmccefnglrnitlprlq

  • Chain '3':
    Sequence, based on SEQRES records: (download) 
    >2plv3 (3:)
glpvmntpgsnqyltadnfqspcalpefdvtppidipgevknmmelaeidtmipfdlsat
kkntmemyrvrlsdkphtddpilclslspasdprlshtmlgeilnyythwagslkftflf
cgsmmatgkllvsyappgadppkkrkeamlgthviwdiglqssctmvvpwisnttyrqti
ddsfteggyisvfyqtrivvplstpremdilgfvsacndfsvrllrdtthieqkalaq

    Sequence, based on observed residues (ATOM records): (download) 
    >2plv3 (3:)
glpvmntpgsnqyltadnfqspcalpefdvtppidipgevknmmelaeidtmipfdlsat
kkntmemyrvrlsdkphtddpilclslspasdprlshtmlgeilnyythwagslkftflf
cgsmmatgkllvsyappgadppkkrkeamlgthviwdiglqssctmvvpwisnttyrqti
ddsfteggyisvfyqtrivvplstpremdilgfvsacndfsvrllrdtthieqka

  • Chain '4':
    Sequence, based on SEQRES records: (download) 
    >2plv4 (4:)
gaqvssqkvgahensnrayggstinyttinyyrdsasnaaskqdfsqdpskftepikdvl
iktapmln

    Sequence, based on observed residues (ATOM records): (download) 
    >2plv4 (4:)
gaqvssqkvgahensnstinyttinyyrdsasnaaskqdfsqdpskftepikdvliktap
mln