PDB entry 2plr

View 2plr on RCSB PDB site
Description: Crystal structure of dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
Class: transferase
Keywords: TMP-binding, ATP-binding, Thymidylate Kinase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSFERASE
Deposited on 2007-04-20, released 2008-04-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.185
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable thymidylate kinase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2plra_
  • Chain 'B':
    Compound: Probable thymidylate kinase
    Species: Sulfolobus tokodaii [TaxId:273063]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CL, PO4, 1PE, PGE, EDO, DTT, EPE, PG4, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2plrA (A:)
mkkgvliafegidgsgkssqatllkdwielkrdvyltewnssdwihdiikeakkkdlltp
ltfslihatdfsdryeryilpmlksgfivisdryiytayardsvrgvdidwvkklysfai
kpditfyirvspdialerikkskrkikpqeagadifpglspeegflkyqglitevydklv
kdenfividgtktpkeiqiqirkfvgelidnsf

    Sequence, based on observed residues (ATOM records): (download) 
    >2plrA (A:)
kkgvliafegidgsgkssqatllkdwielkrdvyltewnssdwihdiikeakkkdlltpl
tfslihatdfsdryeryilpmlksgfivisdryiytayardsvrgvdidwvkklysfaik
pditfyirvspdialerikkskrkikpqeagadifpglspeegflkyqglitevydklvk
denfividgtktpkeiqiqirkfvgelidnsf

  • Chain 'B':
    No sequence available.