PDB entry 2pkh
View 2pkh on RCSB PDB site
Description: Structural Genomics, the crystal structure of the C-terminal domain of histidine utilization repressor from Pseudomonas syringae pv. tomato str. DC3000
Class: DNA binding protein
Keywords: APC84836, histidine utilization repressor, Pseudomonas syringae pv. tomato str. DC3000, structural genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, DNA BINDING PROTEIN
Deposited on
2007-04-17, released
2007-05-15
The last revision prior to the SCOPe 2.02 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.222
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkha1 - Chain 'B':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhb_ - Chain 'C':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhc_ - Chain 'D':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhd_ - Chain 'E':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhe_ - Chain 'F':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhf_ - Chain 'G':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhg_ - Chain 'H':
Compound: Histidine utilization repressor
Species: Pseudomonas syringae pv. tomato [TaxId:223283]
Gene: hutC, PSPTO5172
Database cross-references and differences (RAF-indexed):
- Uniprot Q87UX0 (Start-147)
- modified residue (13)
- modified residue (30)
Domains in SCOPe 2.02: d2pkhh_ - Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2pkhA (A:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhA (A:)
rhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdyl
kqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrqp
vtaarlihpgsrhrlegrftk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2pkhB (B:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhB (B:)
hrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdy
lkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrq
pvtaarlihpgsrhrlegrftk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2pkhC (C:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhC (C:)
hrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdy
lkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrq
pvtaarlihpgsrhrlegrftk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2pkhD (D:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhD (D:)
rhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdyl
kqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrqp
vtaarlihpgsrhrlegrftk
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2pkhE (E:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhE (E:)
hrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdy
lkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrq
pvtaarlihpgsrhrlegrftk
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2pkhF (F:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhF (F:)
rhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdyl
kqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrqp
vtaarlihpgsrhrlegrftk
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2pkhG (G:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhG (G:)
rhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdyl
kqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrqp
vtaarlihpgsrhrlegrftk
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2pkhH (H:)
snaarghrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvna
qvapdylkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrr
twsgrqpvtaarlihpgsrhrlegrftk
Sequence, based on observed residues (ATOM records): (download)
>2pkhH (H:)
hrhtckvmvlkeeaagseralaldmregqrvfhslivhfendipvqiedrfvnaqvapdy
lkqdftlqtpyaylsqvapltegehvveailaeadeckllqidagepcllirrrtwsgrq
pvtaarlihpgsrhrlegrftk