PDB entry 2phn
View 2phn on RCSB PDB site
Description: Crystal structure of an amide bond forming F420-gamma glutamyl ligase from Archaeoglobus fulgidus
Class: ligase
Keywords: gamma-glutamyl ligase, coenzyme F420 biosynthesis, amide bond forming enzyme, metal dependent, new fold, GDP binding, MCSG, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, LIGASE
Deposited on
2007-04-11, released
2007-05-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-10-19, with a file datestamp of
2011-10-14.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: 0.162
AEROSPACI score: 0.73
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: F420-0:gamma-glutamyl ligase
Species: Archaeoglobus fulgidus [TaxId:224325]
Gene: cofE, AF_2256
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2phna_ - Chain 'B':
Compound: F420-0:gamma-glutamyl ligase
Species: Archaeoglobus fulgidus [TaxId:224325]
Gene: cofE, AF_2256
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2phnb_ - Heterogens: MN, ACT, GDP, EDO, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2phnA (A:)
qghmrvevfpveglplikegddlaelissrvrfedgdvlvvcstviskaegrirrleefn
pserakeiaarigkpaefvqavleeseevlldfpfllvkakfgnvcvnagidasnveegs
lllppldpdgsaeklrrrileltgkrvgviitdtngrcfrrgvvgfaigisgvkamkdwi
grkdlygrelevtvecvadeiaafanllmgeggdgipavvvrglnvagegsmeeiyrsee
edvirrclkrclgs
Sequence, based on observed residues (ATOM records): (download)
>2phnA (A:)
rvevfpveglplikegddlaelissrvrfedgdvlvvcstviskaegrirrleefnpser
akeiaarigkpaefvqavleeseevlldfpfllvkakfgnvcvnagidasnveegslllp
pldpdgsaeklrrrileltgkrvgviitdtngrcfrrgvvgfaigisgvkamkdwigrkd
lygrelevtvecvadeiaafanllmgeggdgipavvvrglnvagegsmeeiyrseeedvi
rrclkrcl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2phnB (B:)
qghmrvevfpveglplikegddlaelissrvrfedgdvlvvcstviskaegrirrleefn
pserakeiaarigkpaefvqavleeseevlldfpfllvkakfgnvcvnagidasnveegs
lllppldpdgsaeklrrrileltgkrvgviitdtngrcfrrgvvgfaigisgvkamkdwi
grkdlygrelevtvecvadeiaafanllmgeggdgipavvvrglnvagegsmeeiyrsee
edvirrclkrclgs
Sequence, based on observed residues (ATOM records): (download)
>2phnB (B:)
mrvevfpveglplikegddlaelissrvrfedgdvlvvcstviskaegrirrleefnpse
rakeiaarigkpaefvqavleeseevlldfpfllvkakfgnvcvnagidasnveegslll
ppldpdgsaeklrrrileltgkrvgviitdtngrcfrrgvvgfaigisgvkamkdwigrk
dlygrelevtvecvadeiaafanllmgeggdgipavvvrglnvagegsmeeiyrseeedv
irrclkrcl