PDB entry 2pg1

View 2pg1 on RCSB PDB site
Description: Structural analysis of a cytoplasmic dynein Light Chain-Intermediate Chain complex
Class: structural protein
Keywords: Dynein intermediate chain, dynein light chain, LC8, PIN, TcTex1, STRUCTURAL PROTEIN
Deposited on 2007-04-06, released 2007-06-05
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.208
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Dynein light chain 1, cytoplasmic
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: ctp, Cdlc1, ddlc1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q24117 (Start-90)
  Domains in SCOPe 2.07: d2pg1a_
• Chain 'B':
  Compound: Dynein light chain 1, cytoplasmic
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: ctp, Cdlc1, ddlc1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q24117 (Start-90)
  Domains in SCOPe 2.07: d2pg1b_
• Chain 'C':
  Compound: Dynein light chain 1, cytoplasmic
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: ctp, Cdlc1, ddlc1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q24117 (Start-90)
  Domains in SCOPe 2.07: d2pg1c_
• Chain 'D':
  Compound: Dynein light chain 1, cytoplasmic
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: ctp, Cdlc1, ddlc1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q24117 (Start-90)
  Domains in SCOPe 2.07: d2pg1d_
• Chain 'E':
  Compound: Dynein light chain Tctex-type
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: Dlc90F, Tctex
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q94524 (Start-110)
    • modified residue (65)
    • modified residue (67)
    • modified residue (99)
• Chain 'F':
  Compound: Dynein light chain Tctex-type
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: Dlc90F, Tctex
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q94524 (Start-110)
    • modified residue (65)
    • modified residue (67)
    • modified residue (99)
• Chain 'G':
  Compound: Dynein light chain Tctex-type
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: Dlc90F, Tctex
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q94524 (Start-110)
    • modified residue (65)
    • modified residue (67)
    • modified residue (99)
• Chain 'H':
  Compound: Dynein light chain Tctex-type
  Species: Drosophila melanogaster [TaxId:7227]
  Gene: Dlc90F, Tctex
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q94524 (Start-110)
    • modified residue (65)
    • modified residue (67)
    • modified residue (99)
• Chain 'I':
  Compound: Cytoplasmic dynein 1 intermediate chain 2
  Species: Rattus norvegicus [TaxId:10116]
  Gene: Dync1i2, Dnci2, Dncic2
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q62871
• Chain 'J':
  Compound: Cytoplasmic dynein 1 intermediate chain 2
  Species: Rattus norvegicus [TaxId:10116]
  Gene: Dync1i2, Dnci2, Dncic2
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q62871 (Start-32)
• Chain 'K':
  Compound: Cytoplasmic dynein 1 intermediate chain 2
  Species: Rattus norvegicus [TaxId:10116]
  Gene: Dync1i2, Dnci2, Dncic2
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q62871 (Start-32)
• Chain 'L':
  Compound: Cytoplasmic dynein 1 intermediate chain 2
  Species: Rattus norvegicus [TaxId:10116]
  Gene: Dync1i2, Dnci2, Dncic2
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q62871 (Start-32)
• Heterogens: SO4, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >2pg1A (A:)
  mdmsdrkaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhciv
  grnfgsyvthetrhfiyfylgqvaillfksg
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2pg1A (A:)
  kaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhcivgrnfgs
  yvthetrhfiyfylgqvaillfksg
  

  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >2pg1B (B:)
  mdmsdrkaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhciv
  grnfgsyvthetrhfiyfylgqvaillfksg
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2pg1B (B:)
  kaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhcivgrnfgs
  yvthetrhfiyfylgqvaillfksg
  

  
  
• Chain 'C':
  Sequence, based on SEQRES records: (download)
  

  >2pg1C (C:)
  mdmsdrkaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhciv
  grnfgsyvthetrhfiyfylgqvaillfksg
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2pg1C (C:)
  kaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhcivgrnfgs
  yvthetrhfiyfylgqvaillfksg
  

  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >2pg1D (D:)
  mdmsdrkaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhciv
  grnfgsyvthetrhfiyfylgqvaillfksg
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2pg1D (D:)
  kaviknadmseemqqdavdcatqalekyniekdiaayikkefdkkynptwhcivgrnfgs
  yvthetrhfiyfylgqvaillfksg
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  No sequence available.
  
  
• Chain 'G':
  No sequence available.
  
  
• Chain 'H':
  No sequence available.
  
  
• Chain 'I':
  No sequence available.
  
  
• Chain 'J':
  No sequence available.
  
  
• Chain 'K':
  No sequence available.
  
  
• Chain 'L':
  No sequence available.