PDB entry 2pfx

View 2pfx on RCSB PDB site
Description: Crystal structure of uncharacterized peroxidase-related protein (YP_614459.1) from Silicibacter sp. TM1040 at 1.70 A resolution
Class: oxidoreductase
Keywords: YP_614459.1, uncharacterized peroxidase-related protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, OXIDOREDUCTASE
Deposited on 2007-04-05, released 2007-04-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized peroxidase-related protein
    Species: Silicibacter sp. [TaxId:292414]
    Gene: YP_614459.1, TM1040_2465
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1GDR9 (1-190)
      • leader sequence (0)
      • modified residue (1)
      • modified residue (14)
      • modified residue (35)
      • modified residue (56)
      • modified residue (61)
      • modified residue (74)
      • modified residue (108)
      • modified residue (111)
      • modified residue (125)
      • modified residue (132)
      • modified residue (169)
      • modified residue (179-180)
    Domains in SCOPe 2.08: d2pfxa1, d2pfxa2
  • Chain 'B':
    Compound: Uncharacterized peroxidase-related protein
    Species: Silicibacter sp. [TaxId:292414]
    Gene: YP_614459.1, TM1040_2465
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1GDR9 (1-190)
      • leader sequence (0)
      • modified residue (1)
      • modified residue (14)
      • modified residue (35)
      • modified residue (56)
      • modified residue (61)
      • modified residue (74)
      • modified residue (108)
      • modified residue (111)
      • modified residue (125)
      • modified residue (132)
      • modified residue (169)
      • modified residue (179-180)
    Domains in SCOPe 2.08: d2pfxb2, d2pfxb3
  • Heterogens: ACT, PG4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2pfxA (A:)
gmtkpkeptaldlpmadplpdetqkyfeicqeklgmvpnvlkayafnveklnaftamynd
lmlgesqlskleremiavvvssinkcfyclvahgaavrqlsgdpqlgemlvmnyrvapld
arqrvmldfaakmtrasaeieeadrevlrshgfndrdiwdianvtgffnmtnrvasatam
mpnaeyhgqfr

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2pfxB (B:)
gmtkpkeptaldlpmadplpdetqkyfeicqeklgmvpnvlkayafnveklnaftamynd
lmlgesqlskleremiavvvssinkcfyclvahgaavrqlsgdpqlgemlvmnyrvapld
arqrvmldfaakmtrasaeieeadrevlrshgfndrdiwdianvtgffnmtnrvasatam
mpnaeyhgqfr