PDB entry 2pfj

View 2pfj on RCSB PDB site
Description: Crystal Structure of T7 Endo I resolvase in complex with a Holliday Junction
Class: hydrolase/DNA
Keywords: hydrolase, Holliday junction resolvase, Homodimer, Domain Swapped, Composite active site, HYDROLASE-DNA COMPLEX
Deposited on 2007-04-05, released 2007-10-30
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.268
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Endodeoxyribonuclease 1
    Species: Enterobacteria phage T7 [TaxId:10760]
    Gene: 3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00641
      • engineered (66)
    Domains in SCOPe 2.05: d2pfja_
  • Chain 'B':
    Compound: Endodeoxyribonuclease 1
    Species: Enterobacteria phage T7 [TaxId:10760]
    Gene: 3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00641
      • engineered (66)
    Domains in SCOPe 2.05: d2pfjb_
  • Chain 'Y':
    Compound: 27-mer
  • Chain 'Z':
    Compound: 27-mer
  • Heterogens: CA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2pfjA (A:)
magygakgirkvgafrsgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpn
gifvetaglwesddrkkhllireqhpeldirivfsssrtklykgsptsygefcekhgikf
adklipaewikepkkevpfdrlkrkggkk

    Sequence, based on observed residues (ATOM records): (download) 
    >2pfjA (A:)
sgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpngifvetaglwesddrk
khllireqhpeldirivfsssrtklykgsptsygefcekhgikfadklipaewikepkke
vpfdrlkrk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2pfjB (B:)
magygakgirkvgafrsgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpn
gifvetaglwesddrkkhllireqhpeldirivfsssrtklykgsptsygefcekhgikf
adklipaewikepkkevpfdrlkrkggkk

    Sequence, based on observed residues (ATOM records): (download) 
    >2pfjB (B:)
rsgledkvskqleskgikfeyeewkvpyvipasnhtytpdfllpngifvetaglwesddr
kkhllireqhpeldirivfsssrtklykgsptsygefcekhgikfadklipaewikepkk
evpfdrlkrk

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.