PDB entry 2p66
View 2p66 on RCSB PDB site
Description: Human DNA Polymerase beta complexed with tetrahydrofuran (abasic site) containing DNA
Class: transferase, lyase/DNA
Keywords: DNA Repair, Base Excision Repair, dRP lyase, transferase, lyase/DNA COMPLEX
Deposited on
2007-03-16, released
2007-04-10
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.217
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase beta
Species: Homo sapiens [TaxId:9606]
Gene: POLB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2p66a1, d2p66a2, d2p66a3 - Chain 'B':
Compound: DNA (5'-d(*cp*cp*gp*ap*cp*ap*gp*cp*gp*cp*ap*tp*cp*ap*gp*c)-3')
- Chain 'C':
Compound: DNA (5'-d(*gp*cp*tp*gp*ap*tp*gp*cp*gp*cp*c)-3')
- Chain 'D':
Compound: DNA (5'-d(p*(3dr)p*gp*tp*cp*gp*g)-3')
- Heterogens: NA, PO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2p66A (A:)
mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
lpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdsekdifdyiqwkyrepkdrse
Sequence, based on observed residues (ATOM records): (download)
>2p66A (A:)
pqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvg
tkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlr
knedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgae
ssgdmdvllthpsftsespkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndeke
yphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvage
plpvdsekdifdyiqwkyrepkdrse
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.