PDB entry 2p5q

View 2p5q on RCSB PDB site
Description: Crystal structure of the poplar glutathione peroxidase 5 in the reduced form
Class: oxidoreductase
Keywords: Thioredoxin fold, OXIDOREDUCTASE
Deposited on 2007-03-16, released 2007-07-24
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.178
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutathione peroxidase 5
    Species: Populus trichocarpa x Populus deltoides [TaxId:3695]
    Gene: PtGPX5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2p5qa_
  • Chain 'B':
    Compound: Glutathione peroxidase 5
    Species: Populus trichocarpa x Populus deltoides [TaxId:3695]
    Gene: PtGPX5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2p5qb_
  • Chain 'C':
    Compound: Glutathione peroxidase 5
    Species: Populus trichocarpa x Populus deltoides [TaxId:3695]
    Gene: PtGPX5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2p5qc_
  • Chain 'D':
    Compound: Glutathione peroxidase 5
    Species: Populus trichocarpa x Populus deltoides [TaxId:3695]
    Gene: PtGPX5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2p5qd_
  • Heterogens: CD, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2p5qA (A:)
matqtsknpesvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyek
ykdqgleilafpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflk
lgkwgifgddiqwnfakflvnkdgqvvdryypttsplslerdikqlleis

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5qA (A:)
esvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyekykdqgleil
afpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflklgkwgifgd
diqwnfakflvnkdgqvvdryypttsplslerdikqlleis

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2p5qB (B:)
matqtsknpesvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyek
ykdqgleilafpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflk
lgkwgifgddiqwnfakflvnkdgqvvdryypttsplslerdikqlleis

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5qB (B:)
esvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyekykdqgleil
afpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflklgkwgifgd
diqwnfakflvnkdgqvvdryypttsplslerdikqllei

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2p5qC (C:)
matqtsknpesvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyek
ykdqgleilafpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflk
lgkwgifgddiqwnfakflvnkdgqvvdryypttsplslerdikqlleis

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5qC (C:)
esvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyekykdqgleil
afpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflklgkwgifgd
diqwnfakflvnkdgqvvdryypttsplslerdikqllei

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2p5qD (D:)
matqtsknpesvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyek
ykdqgleilafpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflk
lgkwgifgddiqwnfakflvnkdgqvvdryypttsplslerdikqlleis

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5qD (D:)
esvhdftvkdakendvdlsifkgkvllivnvaskcgmtnsnyaemnqlyekykdqgleil
afpcnqfgeeepgtndqitdfvctrfksefpifdkidvngenasplyrflklgkwgifgd
diqwnfakflvnkdgqvvdryypttsplslerdikqllei