PDB entry 2p5p

View 2p5p on RCSB PDB site
Description: Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III
Class: viral protein
Keywords: West Nile virus, Envelope protein, VIRAL PROTEIN
Deposited on 2007-03-16, released 2008-03-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.244
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Genome polyprotein
    Species: West Nile virus [TaxId:11082]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06935
      • conflict (13-14)
      • conflict (70)
    Domains in SCOPe 2.06: d2p5pa_
  • Chain 'B':
    Compound: Genome polyprotein
    Species: West Nile virus [TaxId:11082]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06935
      • conflict (13-14)
      • conflict (70)
    Domains in SCOPe 2.06: d2p5pb_
  • Chain 'C':
    Compound: Genome polyprotein
    Species: West Nile virus [TaxId:11082]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06935
      • conflict (13-14)
      • conflict (70)
    Domains in SCOPe 2.06: d2p5pc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2p5pA (A:)
gttygvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtv
npfvsvatanakvlieleppfgdsyivvgrgeqqinhhwhksgssigkaftttlkga

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5pA (A:)
ttygvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtvn
pfvsvatanakvlieleppfgdsyivvgrgeqqinhhwhks

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2p5pB (B:)
gttygvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtv
npfvsvatanakvlieleppfgdsyivvgrgeqqinhhwhksgssigkaftttlkga

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5pB (B:)
ttygvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtvn
pfvsvatanakvlieleppfgdsyivvgrgeqqinhhwhks

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2p5pC (C:)
gttygvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtv
npfvsvatanakvlieleppfgdsyivvgrgeqqinhhwhksgssigkaftttlkga

    Sequence, based on observed residues (ATOM records): (download) 
    >2p5pC (C:)
ttygvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtvn
pfvsvatanakvlieleppfgdsyivvgrgeqqinhhwhks