PDB entry 2p4m

View 2p4m on RCSB PDB site
Description: High pH structure of Rtms5 H146S variant
Class: luminescent protein
Keywords: beta barrel, GFP-like protein, chromophore, chromoprotein, luminescent protein
Deposited on 2007-03-12, released 2007-04-03
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.227
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4ma_
  • Chain 'B':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4mb_
  • Chain 'C':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4mc_
  • Chain 'D':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4md_
  • Chain 'E':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4me_
  • Chain 'F':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4mf_
  • Chain 'G':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4mg_
  • Chain 'H':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (0-220)
      • see remark 999 (31)
      • chromophore (61)
      • engineered (141)
    Domains in SCOPe 2.03: d2p4mh_
  • Heterogens: IOD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mA (A:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mB (B:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mC (C:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mD (D:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mE (E:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mF (F:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mG (G:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p4mH (H:)
msviatqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspq
cqygsipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkf
sglnfppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykak
kpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva