PDB entry 2p10

View 2p10 on RCSB PDB site
Description: Crystal structure of a putative TIM-barrel dioxygenase (NP_085906.1) from Mesorhizobium loti at 2.15 A resolution
Class: structural genomics, unknown function
Keywords: NP_085906.1, hypothetical protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2
Deposited on 2007-03-01, released 2007-03-20
The last revision prior to the SCOP 1.75 freeze date was dated 2007-03-20, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.165
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mll9387 protein
    Species: Mesorhizobium loti
    Gene: NP_085906.1, mll9387
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q981G2
      • modified residue (61)
      • modified residue (83)
      • modified residue (107)
      • modified residue (109)
      • modified residue (146)
      • modified residue (154)
      • modified residue (178)
      • modified residue (190)
      • modified residue (206)
      • modified residue (261)
    Domains in SCOP 1.75: d2p10a1
  • Chain 'B':
    Compound: Mll9387 protein
    Species: Mesorhizobium loti
    Gene: NP_085906.1, mll9387
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q981G2 (Start-285)
      • modified residue (61)
      • modified residue (83)
      • modified residue (107)
      • modified residue (109)
      • modified residue (146)
      • modified residue (154)
      • modified residue (178)
      • modified residue (190)
      • modified residue (206)
      • modified residue (261)
    Domains in SCOP 1.75: d2p10b1
  • Chain 'C':
    Compound: Mll9387 protein
    Species: Mesorhizobium loti
    Gene: NP_085906.1, mll9387
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q981G2
      • modified residue (61)
      • modified residue (83)
      • modified residue (107)
      • modified residue (109)
      • modified residue (146)
      • modified residue (154)
      • modified residue (178)
      • modified residue (190)
      • modified residue (206)
      • modified residue (261)
    Domains in SCOP 1.75: d2p10c1
  • Chain 'D':
    Compound: Mll9387 protein
    Species: Mesorhizobium loti
    Gene: NP_085906.1, mll9387
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q981G2
      • modified residue (61)
      • modified residue (83)
      • modified residue (107)
      • modified residue (109)
      • modified residue (146)
      • modified residue (154)
      • modified residue (178)
      • modified residue (190)
      • modified residue (206)
      • modified residue (261)
    Domains in SCOP 1.75: d2p10d1
  • Chain 'E':
    Compound: Mll9387 protein
    Species: Mesorhizobium loti
    Gene: NP_085906.1, mll9387
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q981G2
      • modified residue (61)
      • modified residue (83)
      • modified residue (107)
      • modified residue (109)
      • modified residue (146)
      • modified residue (154)
      • modified residue (178)
      • modified residue (190)
      • modified residue (206)
      • modified residue (261)
    Domains in SCOP 1.75: d2p10e1
  • Chain 'F':
    Compound: Mll9387 protein
    Species: Mesorhizobium loti
    Gene: NP_085906.1, mll9387
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q981G2
      • modified residue (61)
      • modified residue (83)
      • modified residue (107)
      • modified residue (109)
      • modified residue (146)
      • modified residue (154)
      • modified residue (178)
      • modified residue (190)
      • modified residue (206)
      • modified residue (261)
    Domains in SCOP 1.75: d2p10f1
  • Heterogens: ACT, CL, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2p10A (A:)
gmstdtcikrptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgry
rmagrgslagllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkei
gfagvqnfptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavama
kagadilvchmglttggaigarsgksmddcvslinecieaartirddiiilshggpianp
edarfildscqgchgfygassmerlpaeeairsqtlafkairrqpa

    Sequence, based on observed residues (ATOM records): (download) 
    >2p10A (A:)
krptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgryrmagrgsl
agllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkeigfagvqnf
ptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavamakagadilv
chmgltgksmddcvslinecieaartirddiiilshggpianpedarfildscqgchgfy
gassmerlpaeeairsqtlafkairrqp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2p10B (B:)
gmstdtcikrptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgry
rmagrgslagllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkei
gfagvqnfptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavama
kagadilvchmglttggaigarsgksmddcvslinecieaartirddiiilshggpianp
edarfildscqgchgfygassmerlpaeeairsqtlafkairrqpa

    Sequence, based on observed residues (ATOM records): (download) 
    >2p10B (B:)
rptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgryrmagrgsla
gllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkeigfagvqnfp
tvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavamakagadilvc
hmgltgksmddcvslinecieaartirddiiilshggpianpedarfildscqgchgfyg
assmerlpaeeairsqtlafkairrqpa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2p10C (C:)
gmstdtcikrptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgry
rmagrgslagllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkei
gfagvqnfptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavama
kagadilvchmglttggaigarsgksmddcvslinecieaartirddiiilshggpianp
edarfildscqgchgfygassmerlpaeeairsqtlafkairrqpa

    Sequence, based on observed residues (ATOM records): (download) 
    >2p10C (C:)
rptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgryrmagrgsla
gllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkeigfagvqnfp
tvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavamakagadilvc
hmglttrsgksmddcvslinecieaartirddiiilshggpianpedarfildscqgchg
fygassmerlpaeeairsqtlafkairrqp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2p10D (D:)
gmstdtcikrptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgry
rmagrgslagllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkei
gfagvqnfptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavama
kagadilvchmglttggaigarsgksmddcvslinecieaartirddiiilshggpianp
edarfildscqgchgfygassmerlpaeeairsqtlafkairrqpa

    Sequence, based on observed residues (ATOM records): (download) 
    >2p10D (D:)
rptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgryrmagrgsla
gllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkeigfagvqnfp
tvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavamakagadilvc
hmglttgksmddcvslinecieaartirddiiilshggpianpedarfildscqgchgfy
gassmerlpaeeairsqtlafkairrqp

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2p10E (E:)
gmstdtcikrptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgry
rmagrgslagllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkei
gfagvqnfptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavama
kagadilvchmglttggaigarsgksmddcvslinecieaartirddiiilshggpianp
edarfildscqgchgfygassmerlpaeeairsqtlafkairrqpa

    Sequence, based on observed residues (ATOM records): (download) 
    >2p10E (E:)
rptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgryrmagrgsla
gllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkeigfagvqnfp
tvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavamakagadilvc
hmglttrsgksmddcvslinecieaartirddiiilshggpianpedarfildscqgchg
fygassmerlpaeeairsqtlafkairrq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2p10F (F:)
gmstdtcikrptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgry
rmagrgslagllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkei
gfagvqnfptvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavama
kagadilvchmglttggaigarsgksmddcvslinecieaartirddiiilshggpianp
edarfildscqgchgfygassmerlpaeeairsqtlafkairrqpa

    Sequence, based on observed residues (ATOM records): (download) 
    >2p10F (F:)
rptrselvdrfqkkiragepiigggagtglsakseeagdidliviynsgryrmagrgsla
gllaygnanqivvdmarevlpvvrhtpvlagvngtdpfmvmstflrelkeigfagvqnfp
tvglidglfrqnleetgmsyaqevemiaeahkldllttpyvfspedavamakagadilvc
hmgltgksmddcvslinecieaartirddiiilshggpianpedarfildscqgchgfyg
assmerlpaeeairsqtlafkairrq