PDB entry 2p0j

View 2p0j on RCSB PDB site
Description: Structure of restriction endonuclease BstYI bound to non-cognate DNA
Class: hydrolase/DNA
Keywords: Restriction endonuclease, DNA recognition, scanning, hydrolase-DNA COMPLEX
Deposited on 2007-02-28, released 2007-05-01
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-11-16, with a file datestamp of 2011-11-11.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.199
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: BstYI
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Gene: bstYIR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2p0ja_
  • Chain 'B':
    Compound: BstYI
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Gene: bstYIR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2p0jb_
  • Chain 'C':
    Compound: 5'-d(*ap*tp*gp*ap*ap*tp*cp*cp*ap*tp*a)-3'
  • Chain 'D':
    Compound: 5'-d(*tp*ap*tp*gp*gp*ap*tp*tp*cp*ap*t)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2p0jA (A:)
mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskektkqgqilyspval
neafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksynqtdf
vkdrvaievqfgkysfvaydlfvkhmafyvsdkidvgveilpmkelskemssgisyyege
lynvirqgrgvpavplvligiap

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2p0jB (B:)
mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskektkqgqilyspval
neafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksynqtdf
vkdrvaievqfgkysfvaydlfvkhmafyvsdkidvgveilpmkelskemssgisyyege
lynvirqgrgvpavplvligiap

    Sequence, based on observed residues (ATOM records): (download) 
    >2p0jB (B:)
mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskelyspvalneafkek
leakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksynqtdfvkdrvai
evqfgkysfvaydlfvkhmafyvsdkidvgveilpmkelskemssgisyyegelynvirq
grgvpavplvligiap

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.