PDB entry 2oxr

View 2oxr on RCSB PDB site
Description: PAB0955 crystal structure : a GTPase in GDP and Mg bound form from Pyrococcus abyssi (after GTP hydrolysis)
Class: Hydrolase
Keywords: hydrolase, GTP binding protein, GTPase, P-loop, Rossmann fold, GDP
Deposited on 2007-02-21, released 2007-04-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.221
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP(GTP)binding protein
    Species: Pyrococcus abyssi [TaxId:29292]
    Gene: pab0955
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UYR9 (14-End)
      • cloning artifact (11-13)
    Domains in SCOPe 2.08: d2oxra2, d2oxra3
  • Heterogens: MG, GDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2oxrA (A:)
mrgshhhhhhgmasmivvfvgtagsgkttltgefgrylednykvayvnldtgvkelpyep
sidvrefvtveeimregygpngaivesydrlmekfneylnkilrlekendyvlidtpgqm
etflfhefgvrlmenlpyplvvyisdpeilkkpndycfvrffallidlrlgattipalnk
vdllseeekerhrkyfedidyltarlkldpsmqglmaykmcsmmtevlppvrvlylsakt
regfedletlayehyctcgdlt

    Sequence, based on observed residues (ATOM records): (download) 
    >2oxrA (A:)
masmivvfvgtagsgkttltgefgrylednykvayvnldtgvkelpyepsidvrefvtve
eimregygpngaivesydrlmekfneylnkilrlekendyvlidtpgqmetflfhefgvr
lmenlpyplvvyisdpeilkkpndycfvrffallidlrlgattipalnkvdllseeeker
hrkyfedidyltarlkldpsmqglmaykmcsmmtevlppvrvlylsaktregfedletla
yehyct