PDB entry 2oxq
View 2oxq on RCSB PDB site
Description: Structure of the UbcH5 :CHIP U-box complex
Class: Ligase
Keywords: protein-protein complex, Ligase
Deposited on
2007-02-20, released
2008-02-19
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.24
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin-conjugating enzyme E2D 1
Species: Danio rerio [TaxId:7955]
Gene: ube2d1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2oxqa1, d2oxqa2 - Chain 'B':
Compound: Ubiquitin-conjugating enzyme E2D 1
Species: Danio rerio [TaxId:7955]
Gene: ube2d1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2oxqb1, d2oxqb2 - Chain 'C':
Compound: STIP1 homology and U-Box containing protein 1
Species: Danio rerio [TaxId:7955]
Gene: stub1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2oxqc_ - Chain 'D':
Compound: STIP1 homology and U-Box containing protein 1
Species: Danio rerio [TaxId:7955]
Gene: stub1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2oxqd_ - Heterogens: CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2oxqA (A:)
gamgsmalkriqkelqdlqrdppaqcsagpvgddlfhwqatimgpsdspyqggvffltih
fptdypfkppkvafttkiyhpninsngsicldilrsqwspaltvskvllsicsllcdpnp
ddplvpdiahiyksdkekynrlarewtqkyam
Sequence, based on observed residues (ATOM records): (download)
>2oxqA (A:)
gsmalkriqkelqdlqrdppaqcsagpvgddlfhwqatimgpsdspyqggvffltihfpt
dypfkppkvafttkiyhpninsngsicldilrsqwspaltvskvllsicsllcdpnpddp
lvpdiahiyksdkekynrlarewtqkyam
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2oxqB (B:)
gamgsmalkriqkelqdlqrdppaqcsagpvgddlfhwqatimgpsdspyqggvffltih
fptdypfkppkvafttkiyhpninsngsicldilrsqwspaltvskvllsicsllcdpnp
ddplvpdiahiyksdkekynrlarewtqkyam
Sequence, based on observed residues (ATOM records): (download)
>2oxqB (B:)
gsmalkriqkelqdlqrdppaqcsagpvgddlfhwqatimgpsdspyqggvffltihfpt
dypfkppkvafttkiyhpninsngsicldilrsqwspaltvskvllsicsllcdpnpddp
lvpdiahiyksdkekynrlarewtqkyam
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2oxqC (C:)
gamgskkreipdylcgkisfelmaepcitpsgitydrkdieehlqrvghfdpvtrspltq
dqlipnlamkevidafiqen
Sequence, based on observed residues (ATOM records): (download)
>2oxqC (C:)
eipdylcgkisfelmaepcitpsgitydrkdieehlqrvghfdpvtrspltqdqlipnla
mkevidafiqen
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2oxqD (D:)
gamgskkreipdylcgkisfelmaepcitpsgitydrkdieehlqrvghfdpvtrspltq
dqlipnlamkevidafiqen
Sequence, based on observed residues (ATOM records): (download)
>2oxqD (D:)
eipdylcgkisfelmaepcitpsgitydrkdieehlqrvghfdpvtrspltqdqlipnla
mkevidafiqen