SCOPe 2.04: Structural Classification of Proteins

PDB entry 2ovl

View 2ovl on RCSB PDB site
Description: Crystal structure of a racemase from Streptomyces coelicolor A3(2)
Class: isomerase
Keywords: Crystal structure, racemase, Streptomyces coelicolor A3(2), 9301a, Structural Genomics, PSI-2, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, ISOMERASE
Deposited on 2007-02-14, released 2007-03-20
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.13 Å
R-factor: 0.215
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Putative racemase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO3480, SCE65.16c
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RKF7 (3-End)
  - cloning artifact (2)
  - modified residue (27-28)
  - modified residue (62)
  - modified residue (86)
  - modified residue (166)
  - modified residue (194)
  - modified residue (199)
  - modified residue (293)
  - modified residue (317)
  - modified residue (328)
  - modified residue (332)
Domains in SCOPe 2.04: d2ovla1, d2ovla2
Chain 'B':
Compound: Putative racemase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO3480, SCE65.16c
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RKF7 (3-End)
  - cloning artifact (2)
  - modified residue (27-28)
  - modified residue (62)
  - modified residue (86)
  - modified residue (166)
  - modified residue (194)
  - modified residue (199)
  - modified residue (293)
  - modified residue (317)
  - modified residue (328)
  - modified residue (332)
Domains in SCOPe 2.04: d2ovlb1, d2ovlb2
Chain 'C':
Compound: Putative racemase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO3480, SCE65.16c
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RKF7 (3-End)
  - cloning artifact (2)
  - modified residue (27-28)
  - modified residue (62)
  - modified residue (86)
  - modified residue (166)
  - modified residue (194)
  - modified residue (199)
  - modified residue (293)
  - modified residue (317)
  - modified residue (328)
  - modified residue (332)
Domains in SCOPe 2.04: d2ovlc1, d2ovlc2
Chain 'D':
Compound: Putative racemase
Species: Streptomyces coelicolor [TaxId:100226]
Gene: SCO3480, SCE65.16c
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RKF7 (3-End)
  - cloning artifact (2)
  - modified residue (62)
  - modified residue (86)
  - modified residue (166)
  - modified residue (194)
  - modified residue (199)
  - modified residue (293)
  - modified residue (317)
  - modified residue (332)
Domains in SCOPe 2.04: d2ovld1, d2ovld2
Heterogens: NA, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2ovlA (A:)
msliervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaav
atmvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirar
tplwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdr
vsalrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivre
sghtiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshg
vhdltvhalasvphrtymeahgfglhaymaepmavtdgcvsapdrpghgvvldferlgrl
avgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2ovlA (A:)
liervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaavat
mvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirartp
lwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdrvs
alrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivresg
htiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshgvh
dltvhalasvphrtymeahlhaymaepmavtdgcvsapdrpghgvvldferlgrlav

Chain 'B':
Sequence, based on SEQRES records: (download)

>2ovlB (B:)
msliervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaav
atmvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirar
tplwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdr
vsalrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivre
sghtiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshg
vhdltvhalasvphrtymeahgfglhaymaepmavtdgcvsapdrpghgvvldferlgrl
avgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2ovlB (B:)
liervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaavat
mvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirartp
lwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdrvs
alrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivresg
htiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshgvh
dltvhalasvphrtymeahlhaymaepmavtdgcvsapdrpghgvvldferlgrlav

Chain 'C':
Sequence, based on SEQRES records: (download)

>2ovlC (C:)
msliervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaav
atmvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirar
tplwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdr
vsalrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivre
sghtiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshg
vhdltvhalasvphrtymeahgfglhaymaepmavtdgcvsapdrpghgvvldferlgrl
avgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2ovlC (C:)
liervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaavat
mvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirartp
lwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdrvs
alrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivresg
htiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshgvh
dltvhalasvphrtymeahlhaymaepmavtdgcvsapdrpghgvvldferlgrlav

Chain 'D':
Sequence, based on SEQRES records: (download)

>2ovlD (D:)
msliervrtdlyriplptrltdsthgammdfelitvriedsdgatglgytytvnhggaav
atmvdkdlrgcllgadaeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirar
tplwklfggydpvvpvyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdr
vsalrehlgdsfplmvdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivre
sghtiaggenlhtlydfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshg
vhdltvhalasvphrtymeahgfglhaymaepmavtdgcvsapdrpghgvvldferlgrl
avgeghhhhhh

Sequence, based on observed residues (ATOM records): (download)

>2ovlD (D:)
liervrtdlyripldfelitvriedsdgatglgytytvnhggaavatmvdkdlrgcllga
daeqiekiwqsmwwrlhyagrgghatsaisavdialwdlkgirartplwklfggydpvvp
vyaggidlelpvadlktqadrflaggfraikmkvgrpdlkedvdrvsalrehlgdsfplm
vdanmkwtvdgairaaralapfdlhwieeptipddlvgnarivresghtiaggenlhtly
dfhnavragsltlpepdvsniggyttfrkvaalaeannmlltshgvhdltvhalasvphr
tymeahmavtdgcvsapdrpghgvvldferlgrl