PDB entry 2otc

View 2otc on RCSB PDB site
Description: ornithine transcarbamoylase complexed with n-(phosphonacetyl)-l-ornithine
Class: transferase
Keywords: transferase, otcase, ornithine, transcarbamoylase, arginine synthesis, urea cycle
Deposited on 1997-06-15, released 1998-06-17
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.213
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otca1, d2otca2
  • Chain 'B':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otcb1, d2otcb2
  • Chain 'C':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otcc1, d2otcc2
  • Chain 'D':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otcd1, d2otcd2
  • Chain 'E':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otce1, d2otce2
  • Chain 'F':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otcf1, d2otcf2
  • Chain 'G':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otcg1, d2otcg2
  • Chain 'H':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otch1, d2otch2
  • Chain 'I':
    Compound: ornithine carbamoyltransferase
    Species: Escherichia coli BL21(DE3) [TaxId:469008]
    Gene: ARGI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04391 (0-332)
      • conflict (120)
    Domains in SCOPe 2.05: d2otci1, d2otci2
  • Heterogens: PAO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcA (A:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcB (B:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcC (C:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcD (D:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcE (E:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcF (F:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcG (G:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcH (H:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2otcI (I:)
sgfyhkhflklldftpaelnsllqlaaklkadkksgkeeakltgknialifekdstrtrc
sfevaaydqgarvtylgpsgsqighkesikdtarvlgrmydgiqyrgygqeivetlaeya
rvpvwngltnefhptqlladlltmqehlpgkafnemtlvyagdarnnmgnsmleaaaltg
ldlrlvapqacwpeaalvtecralaqqnggnitltedvakgvegadfiytdvwvsmgeak
ekwaeriallreyqvnskmmqltgnpevkflhclpafhddqttlgkkmaeefglhggmev
tdevfesaasivfdqaenrmhtikavmvatlsk