PDB entry 2os9
View 2os9 on RCSB PDB site
Description: crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with myoinositol
Class: Sugar Binding Protein
Keywords: Surfactant protein, Carbohydrate recognition domain, trimeric, Sugar Binding Protein
Deposited on
2007-02-05, released
2007-05-08
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.197
AEROSPACI score: 0.55
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pulmonary surfactant-associated protein D
Species: Homo sapiens [TaxId:9606]
Gene: SFTPD, PSPD, SFTP4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2os9a1, d2os9a2 - Chain 'B':
Compound: Pulmonary surfactant-associated protein D
Species: Homo sapiens [TaxId:9606]
Gene: SFTPD, PSPD, SFTP4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2os9b1, d2os9b2 - Chain 'C':
Compound: Pulmonary surfactant-associated protein D
Species: Homo sapiens [TaxId:9606]
Gene: SFTPD, PSPD, SFTP4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2os9c1, d2os9c2 - Heterogens: CA, INS, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2os9A (A:)
amadigsdvaslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpft
eaqllctqaggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvys
nwapgepnddggsedcveiftngkwndracgekrlvvcef
Sequence, based on observed residues (ATOM records): (download)
>2os9A (A:)
aslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpfteaqllctqa
ggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvysnwapgepnd
dggsedcveiftngkwndracgekrlvvcef
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2os9B (B:)
amadigsdvaslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpft
eaqllctqaggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvys
nwapgepnddggsedcveiftngkwndracgekrlvvcef
Sequence, based on observed residues (ATOM records): (download)
>2os9B (B:)
aslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpfteaqllctqa
ggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvysnwapgepnd
dggsedcveiftngkwndracgekrlvvcef
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2os9C (C:)
amadigsdvaslrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpft
eaqllctqaggqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvys
nwapgepnddggsedcveiftngkwndracgekrlvvcef
Sequence, based on observed residues (ATOM records): (download)
>2os9C (C:)
slrqqvealqgqvqhlqaafsqykkvelfpngqsvgekifktagfvkpfteaqllctqag
gqlasprsaaenaalqqlvvakneaaflsmtdsktegkftyptgeslvysnwapgepndd
ggsedcveiftngkwndracgekrlvvcef