PDB entry 2or8
View 2or8 on RCSB PDB site
Description: Tim-1
Class: immune system
Keywords: Beta barrel, immunoglobulin fold, IgV domain, TIM, IMMUNE SYSTEM
Deposited on
2007-02-02, released
2007-04-03
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.232
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hepatitis A virus cellular receptor 1 homolog
Species: Mus musculus [TaxId:10090]
Gene: Havcr1, Tim1, Timd1
Database cross-references and differences (RAF-indexed):
- Uniprot Q5QNS5 (1-111)
- initiating methionine (0)
- cloning artifact (112-115)
Domains in SCOPe 2.04: d2or8a_ - Chain 'B':
Compound: Hepatitis A virus cellular receptor 1 homolog
Species: Mus musculus [TaxId:10090]
Gene: Havcr1, Tim1, Timd1
Database cross-references and differences (RAF-indexed):
- Uniprot Q5QNS5 (1-111)
- initiating methionine (0)
- cloning artifact (112-115)
Domains in SCOPe 2.04: d2or8b_ - Heterogens: ACT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2or8A (A:)
mdsyvevkgvvghpvtlpctystyrgitttcwgrgqcpssacqntliwtnghrvtyqkss
rynlkghisegdvsltiensvesdsglyccrveipgwfndqkvtfslqvkpelvpr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2or8B (B:)
mdsyvevkgvvghpvtlpctystyrgitttcwgrgqcpssacqntliwtnghrvtyqkss
rynlkghisegdvsltiensvesdsglyccrveipgwfndqkvtfslqvkpelvpr