PDB entry 2oqj
View 2oqj on RCSB PDB site
Description: Crystal structure analysis of Fab 2G12 in complex with peptide 2G12.1
Class: Immune system
Keywords: immunoglobulin fold, Immune system
Deposited on
2007-01-31, released
2008-01-15
The last revision prior to the SCOP 1.75 freeze date was dated
2008-05-27, with a file datestamp of
2008-05-23.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.236
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fab 2G12 light chain
Species: HOMO SAPIENS
- Chain 'B':
Compound: Fab 2G12 heavy chain
Species: HOMO SAPIENS
Domains in SCOP 1.75: d2oqjb1, d2oqjb2 - Chain 'C':
Compound: peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK)
Species: synthetic, synthetic
- Chain 'D':
Compound: Fab 2G12 light chain
Species: HOMO SAPIENS
- Chain 'E':
Compound: Fab 2G12 heavy chain
Species: HOMO SAPIENS
Domains in SCOP 1.75: d2oqje1, d2oqje2 - Chain 'F':
Compound: peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK)
Species: synthetic, synthetic
- Chain 'G':
Compound: Fab 2G12 light chain
Species: HOMO SAPIENS
- Chain 'H':
Compound: Fab 2G12 heavy chain
Species: HOMO SAPIENS
Domains in SCOP 1.75: d2oqjh1, d2oqjh2 - Chain 'I':
Compound: peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK)
Species: synthetic, synthetic
- Chain 'J':
Compound: Fab 2G12 light chain
Species: HOMO SAPIENS
- Chain 'K':
Compound: Fab 2G12 heavy chain
Species: HOMO SAPIENS
Domains in SCOP 1.75: d2oqjk1, d2oqjk2 - Chain 'L':
Compound: peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK)
Species: synthetic, synthetic
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2oqjB (B:)
evqlvesggglvkaggslilscgvsnfrisahtmnwvrrvpggglewvasistsstyrdy
adavkgrftvsrddledfvylqmhkmrvedtaiyycarkgsdrlsdndpfdawgpgtvvt
vspastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2oqjE (E:)
evqlvesggglvkaggslilscgvsnfrisahtmnwvrrvpggglewvasistsstyrdy
adavkgrftvsrddledfvylqmhkmrvedtaiyycarkgsdrlsdndpfdawgpgtvvt
vspastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2oqjH (H:)
evqlvesggglvkaggslilscgvsnfrisahtmnwvrrvpggglewvasistsstyrdy
adavkgrftvsrddledfvylqmhkmrvedtaiyycarkgsdrlsdndpfdawgpgtvvt
vspastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.
- Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)
>2oqjK (K:)
evqlvesggglvkaggslilscgvsnfrisahtmnwvrrvpggglewvasistsstyrdy
adavkgrftvsrddledfvylqmhkmrvedtaiyycarkgsdrlsdndpfdawgpgtvvt
vspastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk
- Chain 'L':
No sequence available.