PDB entry 2op9
View 2op9 on RCSB PDB site
Description: Substrate Specificity Profiling and Identification of a New Class of Inhibitor for the Major Protease of the SARS Coronavirus
Class: hydrolase
Keywords: SARS, 3Clpro, proteinase, protease, HYDROLASE
Deposited on
2007-01-27, released
2007-07-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-01-24, with a file datestamp of
2018-01-19.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Replicase polyprotein 1ab (pp1ab, ORF1AB) 3C-like proteinase (3CL-PRO, 3CLp)
Species: SARS coronavirus [TaxId:227859]
Gene: 3Clpro
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2op9a2, d2op9a3 - Chain 'B':
Compound: Replicase polyprotein 1ab (pp1ab, ORF1AB) 3C-like proteinase (3CL-PRO, 3CLp)
Species: SARS coronavirus [TaxId:227859]
Gene: 3Clpro
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2op9b_ - Heterogens: WR1, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2op9A (A:)
asgfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictaedmlnpnyedlli
rksnhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyn
gspsgvyqcamrpnhtikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdleg
kfygpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkyny
epltqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrq
cs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2op9B (B:)
asgfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictaedmlnpnyedlli
rksnhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyn
gspsgvyqcamrpnhtikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdleg
kfygpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkyny
epltqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrq
cs
Sequence, based on observed residues (ATOM records): (download)
>2op9B (B:)
sgfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictedmlnpnyedllirk
snhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyngs
psgvyqcamrpnhtikgsflngscgsvgfnidycvsfcymhhmelptgvhagtdlegkfy
gpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkynyepl
tqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrqcs