PDB entry 2oox
View 2oox on RCSB PDB site
Description: Crystal structure of the adenylate sensor from AMP-activated protein kinase complexed with AMP
Class: transferase
Keywords: AMPK, kinase, AMP, TRANSFERASE
Deposited on
2007-01-26, released
2007-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.21
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: SNF1-like protein kinase ssp2
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: ssp2, SPCC74.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ooxa1 - Chain 'B':
Compound: SPCC1919.03c protein
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPCC1919.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ooxb1 - Chain 'C':
Compound: SNF1-like protein kinase ssp2
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: ssp2, SPCC74.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ooxc_ - Chain 'D':
Compound: SPCC1919.03c protein
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPCC1919.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ooxd_ - Chain 'E':
Compound: Hypothetical protein C1556.08c in chromosome I
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPAC1556.08c, SPAC1F12.01c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ooxe1, d2ooxe2, d2ooxe3 - Chain 'G':
Compound: Hypothetical protein C1556.08c in chromosome I
Species: Schizosaccharomyces pombe [TaxId:4896]
Gene: SPAC1556.08c, SPAC1F12.01c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ooxg1, d2ooxg2, d2ooxg3 - Heterogens: AMP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2ooxA (A:)
sqstrkksrrnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiks
rweiphckregkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkss
fpfldlcamlvcklfsa
Sequence, based on observed residues (ATOM records): (download)
>2ooxA (A:)
rnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiksrweiphckr
egkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkssfpfldlcam
lvcklfsa
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ooxB (B:)
mseseqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvl
lnhlaaantqlgvlalsattryhrkyvttamfknfdv
Sequence, based on observed residues (ATOM records): (download)
>2ooxB (B:)
seqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvllnh
laaantqlgvlalsattryhrkyvttamfknfd
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2ooxC (C:)
sqstrkksrrnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiks
rweiphckregkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkss
fpfldlcamlvcklfsa
Sequence, based on observed residues (ATOM records): (download)
>2ooxC (C:)
rrnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiksrweiphck
regkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkssfpfldlca
mlvcklfs
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2ooxD (D:)
mseseqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvl
lnhlaaantqlgvlalsattryhrkyvttamfknfdv
Sequence, based on observed residues (ATOM records): (download)
>2ooxD (D:)
seqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvllnh
laaantqlgvlalsattryhrkyvttamfknfd
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2ooxE (E:)
mdvqetqkgalkeiqafirsrtsydvlptsfrlivfdvtlfvktslslltlnnivsaplw
dseankfaglltmadfvnvikyyyqsssfpeaiaeidkfrllglreverkigaippetiy
vhpmhslmdaclamsksrarriplidvdgetgsemivsvltqyrilkfismncketamlr
vplnqmtigtwsnlatasmetkvydvikmlaeknisavpivnsegtllnvyesvdvmhli
qdgdysnldlsvgeallkrpanfdgvhtcratdrldgifdaikhsrvhrlfvvdenlkle
gilsladilnyiiydktttpgvpeqtdnfesav
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2ooxG (G:)
mdvqetqkgalkeiqafirsrtsydvlptsfrlivfdvtlfvktslslltlnnivsaplw
dseankfaglltmadfvnvikyyyqsssfpeaiaeidkfrllglreverkigaippetiy
vhpmhslmdaclamsksrarriplidvdgetgsemivsvltqyrilkfismncketamlr
vplnqmtigtwsnlatasmetkvydvikmlaeknisavpivnsegtllnvyesvdvmhli
qdgdysnldlsvgeallkrpanfdgvhtcratdrldgifdaikhsrvhrlfvvdenlkle
gilsladilnyiiydktttpgvpeqtdnfesav
Sequence, based on observed residues (ATOM records): (download)
>2ooxG (G:)
mdvqetqkgalkeiqafirsrtsydvlptsfrlivfdvtlfvktslslltlnnivsaplw
dseankfaglltmadfvnvikyyyqsssfpeaiaeidkfrllglreverkigaippetiy
vhpmhslmdaclamsksrarriplidvdgetgsemivsvltqyrilkfismncketamlr
vplnqmtigtwsnlatasmetkvydvikmlaeknisavpivnsegtllnvyesvdvmhli
qdgdysnldlsvgeallkrpanfdgvhtcratdrldgifdaikhsrvhrlfvvdenlkle
gilsladilnyiiydktttpgvpe