PDB entry 2omy

View 2omy on RCSB PDB site
Description: Crystal structure of InlA S192N/hEC1 complex
Class: cell invasion/cell adhesion
Keywords: leucine-rich-repeat, invasion protein, IG-like domain, adhesion protein
Deposited on 2007-01-23, released 2007-06-05
The last revision prior to the SCOP 1.73 freeze date was dated 2007-06-05, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.159
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Internalin-A
    Species: Listeria monocytogenes
    Gene: inlA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25146 (0-459)
      • engineered (156)
      • cloning artifact (460)
    Domains in SCOP 1.73: d2omya1, d2omya2
  • Chain 'B':
    Compound: epithelial-cadherin
    Species: HOMO SAPIENS
    Gene: CDH1, CDHE, UVO
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12830 (5-103)
      • cloning artifact (0-4)
      • cloning artifact (104)
    Domains in SCOP 1.73: d2omyb1
  • Heterogens: CA, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2omyA (A:)
atitqdtpinqiftdtalaekmktvlgktnvtdtvsqtdldqvttlqadrlgiksidgve
ylnnltqinfsnnqltditplknltklvdilmnnnqiaditplanltnltgltlfnnqit
didplknltnlnrlelssntisdisalsgltslqqlnfgnqvtdlkplanlttlerldis
snkvsdisvlakltnlesliatnnqisditplgiltnldelslngnqlkdigtlasltnl
tdldlannqisnlaplsgltkltelklganqisnisplagltaltnlelnenqledispi
snlknltyltlyfnnisdispvssltklqrlffynnkvsdvsslanltninwlsaghnqi
sdltplanltritqlglndqawtnapvnykanvsipntvknvtgaliapatisdggsyte
pditwnlpsytnevsytfsqpvtigkgtttfsgtvtqplka

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2omyB (B:)
gplgswvippiscpenekgpfpknlvqiksnkdkegkvfysitgqgadtppvgvfiiere
tgwlkvtepldreriatytlfshavssngnavedpmeilitvtdq