PDB entry 2om7
View 2om7 on RCSB PDB site
Description: Structural Basis for Interaction of the Ribosome with the Switch Regions of GTP-bound Elongation Factors
Class: ribosome
Keywords: RNA-Protein Complex, RIBOSOME
Deposited on
2007-01-21, released
2008-01-15
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-12.
Experiment type: EM
Resolution: 7.3 Å
R-factor: N/A
AEROSPACI score: -0.05
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fragment of 16S rRNA (h14)
Species: Thermus thermophilus [TaxId:274]
- Chain 'B':
Compound: Fragment of 16S rRNA (h15)
Species: Thermus thermophilus [TaxId:274]
- Chain 'C':
Compound: Fragment of 16S rRNA (h44)
Species: Thermus thermophilus [TaxId:274]
- Chain 'D':
Compound: 16S ribosomal RNA (H5)
Species: Thermus thermophilus [TaxId:274]
- Chain 'E':
Compound: 30S ribosomal protein S12
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d2om7e1 - Chain 'F':
Compound: Fragment of23S rRNA (H95)
Species: Thermus thermophilus [TaxId:274]
- Chain 'G':
Compound: Fragment of23S rRNA (H68)
Species: Thermus thermophilus [TaxId:274]
- Chain 'H':
Compound: Fragment of23S rRNA (H89)
Species: Thermus thermophilus [TaxId:274]
- Chain 'I':
Compound: Fragment of23S rRNA (H42-44)
Species: Thermus thermophilus [TaxId:274]
- Chain 'J':
Compound: Fragment of23S rRNA (H76)
Species: Thermus thermophilus [TaxId:274]
- Chain 'K':
Compound: 50s ribosomal protein l1
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d2om7k1 - Chain 'L':
Compound: Elongation factor G
Species: Thermus thermophilus [TaxId:274]
Gene: fusA, fus
Database cross-references and differences (RAF-indexed):
- Chain 'M':
Compound: p/E-tRNA
Species: Thermus thermophilus [TaxId:274]
- Chain 'N':
Compound: 30S ribosomal protein S2
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d2om7n1
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2om7E (E:)
mvalptinqlvrkgrekvrkkskvpalkgapfrrgvctvvrtvtpkkpnsalrkvakvrl
tsgyevtayipgeghnlqehsvvlirggrvkdlpgvryhivrgvydaagvkdrkksrsky
gtkkpkeaaktaakk
Sequence, based on observed residues (ATOM records): (download)
>2om7E (E:)
ptinqlvrkgrekvrkkskvpalkgapfrrgvctvvrtvtpkkpnsalrkvakvrltsgy
evtayipgeghnlqehsvvlirggrvkdlpgvryhivrgvydaagvkdrkksrskygtkk
pkeaa
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.
- Chain 'K':
Sequence, based on SEQRES records: (download)
>2om7K (K:)
mpkhgkryrallekvdpnkvytideaarlvkelatakfdetvevhaklgidprrsdqnvr
gtvslphglgkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdv
mgavgsklgrilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkas
fppekladnirafiraleahkpegakgtflrsvyvtttmgpsvrinphs
Sequence, based on observed residues (ATOM records): (download)
>2om7K (K:)
kvytideaartakfdetvevhaklgidprrsdqnvrgtvslphglgkqvrvlaiakgeki
keaeeagadyvggeeiiqkildgwmdfvmgavgsklgrilgprglnpkagtvgfnigeii
reikagriefrndktgaihapvgkasfppekladnirafiraleahkpegakgtflrsvy
vtttmgpsvri
- Chain 'L':
No sequence available.
- Chain 'M':
No sequence available.
- Chain 'N':
Sequence, based on SEQRES records: (download)
>2om7N (N:)
mpveitvkelleagvhfgherkrwnpkfaryiyaerngihiidlqktmeelertfrfied
lamrggtilfvgtkkqaqdivrmeaeragmpyvnqrwlggmltnfktisqrvhrleelea
lfaspeieerpkkeqvrlkhelerlqkylsgfrllkrlpdaifvvdptkeaiavrearkl
fipvialadtdsdpdlvdyiipgnddairsiqlilsravdliiqarggvvepspsyalvq
eaeatetpegesevea
Sequence, based on observed residues (ATOM records): (download)
>2om7N (N:)
vkelleagvhfgherkrwnpkfaryiyaerngihiidlqktmeelertfrfiedlamrgg
tilfvgtkkqaqdivrmeaeragmpyvnqrwlggmltnfktisqrvhrleelealfaspe
ieerpkkeqvrlkhelerlqkylsgfrllkrlpdaifvvdptkeaiavrearklfipvia
ladtdsdpdlvdyiipgnddairsiqlilsravdliiqarggvvepspsyalvqe