PDB entry 2oky

View 2oky on RCSB PDB site
Description: A non-invasive GFP-based biosensor for mercury ions
Class: luminescent protein
Keywords: mercury sensor, GFP,, LUMINESCENT PROTEIN
Deposited on 2007-01-18, released 2007-12-04
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-07-14, with a file datestamp of 2009-07-10.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.225
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212
      • see remark 999 (63)
      • chromophore (65)
      • engineered (204)
    Domains in SCOPe 2.05: d2okya_
  • Chain 'B':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212
      • see remark 999 (63)
      • chromophore (65)
      • engineered (204)
    Domains in SCOPe 2.05: d2okyb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2okyA (A:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >2okyA (A:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2okyB (B:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >2okyB (B:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi