SCOPe 2.03: Structural Classification of Proteins — extended

PDB entry 2okw

View 2okw on RCSB PDB site
Description: A non-invasive GFP-based biosensor for mercury ions
Class: luminescent protein
Keywords: mercury, biosensor, LUMINESCENT PROTEIN
Deposited on 2007-01-17, released 2007-12-04
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-07-14, with a file datestamp of 2009-07-10.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.232
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - see remark 999 (63)
  - chromophore (65)
  - engineered (204)
Domains in SCOPe 2.03: d2okwa_
Chain 'B':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - see remark 999 (63)
  - chromophore (65)
  - engineered (204)
Domains in SCOPe 2.03: d2okwb_
Chain 'C':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - see remark 999 (63)
  - chromophore (65)
  - engineered (204)
Domains in SCOPe 2.03: d2okwc_
Chain 'D':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - see remark 999 (63)
  - chromophore (65)
  - engineered (204)
Domains in SCOPe 2.03: d2okwd_
Chain 'E':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - see remark 999 (63)
  - chromophore (65)
  - engineered (204)
Domains in SCOPe 2.03: d2okwe_
Chain 'F':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212
  - see remark 999 (63)
  - chromophore (65)
  - engineered (204)
Domains in SCOPe 2.03: d2okwf_
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2okwA (A:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

Sequence, based on observed residues (ATOM records): (download)

>2okwA (A:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi

Chain 'B':
Sequence, based on SEQRES records: (download)

>2okwB (B:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

Sequence, based on observed residues (ATOM records): (download)

>2okwB (B:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi

Chain 'C':
Sequence, based on SEQRES records: (download)

>2okwC (C:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

Sequence, based on observed residues (ATOM records): (download)

>2okwC (C:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi

Chain 'D':
Sequence, based on SEQRES records: (download)

>2okwD (D:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

Sequence, based on observed residues (ATOM records): (download)

>2okwD (D:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi

Chain 'E':
Sequence, based on SEQRES records: (download)

>2okwE (E:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

Sequence, based on observed residues (ATOM records): (download)

>2okwE (E:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi

Chain 'F':
Sequence, based on SEQRES records: (download)

>2okwF (F:)
mskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagithgmdelyk

Sequence, based on observed residues (ATOM records): (download)

>2okwF (F:)
lftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlvttlgy
gvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvnrielk
gidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladhyqqnt
pigdgpvllpdnhylstqcalskdpnekrdhmvllefvtaagi