PDB entry 2okl

View 2okl on RCSB PDB site
Description: Crystal structure of Peptide Deformylase 2 with actinonin from Bacillus cereus
Class: Hydrolase
Keywords: hydrolase
Deposited on 2007-01-17, released 2008-01-15
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.228
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PEPTIDE deformylase 2
    Species: Bacillus cereus [TaxId:226900]
    Gene: def2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q819K2 (1-184)
      • expression tag (0)
    Domains in SCOPe 2.01: d2okla_
  • Chain 'B':
    Compound: PEPTIDE deformylase 2
    Species: Bacillus cereus [TaxId:226900]
    Gene: def2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2oklb_
  • Heterogens: ZN, BB2, CIT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2oklA (A:)
hmltmkdviregdpilrnvaeevslpaseedtttlkemiefvinsqdpemaekyslrpgi
glaapqigvskkmiavhvtdadgtlyshalfnpkiishsvertylqggegclsvdrevpg
yvprytritvkatsingeevklrlkglpaivfqheidhlngvmfydhinkenpfaapdds
kpler

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2oklB (B:)
hmltmkdviregdpilrnvaeevslpaseedtttlkemiefvinsqdpemaekyslrpgi
glaapqigvskkmiavhvtdadgtlyshalfnpkiishsvertylqggegclsvdrevpg
yvprytritvkatsingeevklrlkglpaivfqheidhlngvmfydhinkenpfaapdds
kpler

    Sequence, based on observed residues (ATOM records): (download) 
    >2oklB (B:)
mltmkdviregdpilrnvaeevslpaseedtttlkemiefvinsqdpemaekyslrpgig
laapqigvskkmiavhvtdadgtlyshalfnpkiishsvertylqggegclsvdrevpgy
vprytritvkatsingeevklrlkglpaivfqheidhlngvmfydhinkenpfaapddsk
pler