PDB entry 2ocy
View 2ocy on RCSB PDB site
Description: Complex of the guanine exchange factor Sec2p and the Rab GTPase Sec4p
Class: endocytosis/exocytosis
Keywords: Rab, GEF, guanine exchange factor, coiled-coil
Deposited on
2006-12-21, released
2007-02-27
The last revision prior to the SCOP 1.75 freeze date was dated
2007-02-27, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: 0.25
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Rab guanine nucleotide exchange factor SEC2
Species: Saccharomyces cerevisiae
Gene: SEC2
Database cross-references and differences (RAF-indexed):
- Uniprot P17065 (3-End)
- cloning artifact (0-2)
- modified residue (101)
- modified residue (144)
Domains in SCOP 1.75: d2ocya1 - Chain 'B':
Compound: Rab guanine nucleotide exchange factor SEC2
Species: Saccharomyces cerevisiae
Gene: SEC2
Database cross-references and differences (RAF-indexed):
- Uniprot P17065 (3-End)
- cloning artifact (0-2)
- modified residue (101)
- modified residue (144)
Domains in SCOP 1.75: d2ocyb1 - Chain 'C':
Compound: Ras-related protein SEC4
Species: Saccharomyces cerevisiae
Gene: SEC4, SRO6
Database cross-references and differences (RAF-indexed):
- Uniprot P07560 (0-End)
- modified residue (3)
- modified residue (76)
Domains in SCOP 1.75: d2ocyc1
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2ocyA (A:)
smalstqliesvdkqshleeqlnkslktiasqkaaienynqlkedyntlkrelsdrddev
krlrediakenelrtkaeeeadklnkevedltaslfdeannmvadarkekyaieilnkrl
teqlrekdtlldtltlqlknlkkvmhsldnestv
Sequence, based on observed residues (ATOM records): (download)
>2ocyA (A:)
smalstqliesvdkqshleeqlnkslktiasqkaaienynqlkedyntlkrelsdrddev
krlrediakenelrtkaeeeadklnkevedltaslfdeannmvadarkekyaieilnkrl
teqlrekdtlldtltlqlknlkkvmhsld
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ocyB (B:)
smalstqliesvdkqshleeqlnkslktiasqkaaienynqlkedyntlkrelsdrddev
krlrediakenelrtkaeeeadklnkevedltaslfdeannmvadarkekyaieilnkrl
teqlrekdtlldtltlqlknlkkvmhsldnestv
Sequence, based on observed residues (ATOM records): (download)
>2ocyB (B:)
smalstqliesvdkqshleeqlnkslktiasqkaaienynqlkedyntlkrelsdrddev
krlrediakenelrtkaeeeadklnkevedltaslfdeannmvadarkekyaieilnkrl
teqlrekdtlldtltlqlknlkkvmhsld
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2ocyC (C:)
dsimkilligdsgvgkscllvrfvedkfnpsfittigidfkiktvdingkkvklqlwdta
gqerfrtittayyrgamgiilvydvtdertftnikqwfktvnehandeaqlllvgnksdm
etrvvtadqgealakelgipfiessaknddnvneifftlakliqekidsn
Sequence, based on observed residues (ATOM records): (download)
>2ocyC (C:)
dsimkilligdsgvgkscllvrfvedkfnpsfittigidfkiktvdklqlwdtagqerfr
tittayyrgamgiilvydvtdertftnikqwfktvnehandeaqlllvgdqgealakelg
ipfiessanvneifftlakliqekids