PDB entry 2ocp

View 2ocp on RCSB PDB site
Description: Crystal Structure of Human Deoxyguanosine Kinase
Class: transferase
Keywords: protein-nucleotide complex
Deposited on 2006-12-21, released 2007-01-16
The last revision prior to the SCOP 1.75 freeze date was dated 2007-01-16, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.265
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpa1
  • Chain 'B':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpb1
  • Chain 'C':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpc1
  • Chain 'D':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpd1
  • Chain 'E':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpe1
  • Chain 'F':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpf1
  • Chain 'G':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocpg1
  • Chain 'H':
    Compound: deoxyguanosine kinase
    Species: HOMO SAPIENS
    Gene: DGUOK, DGK
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ocph1
  • Heterogens: DTP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ocpA (A:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpA (A:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ocpB (B:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpB (B:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ocpC (C:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpC (C:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ocpD (D:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpD (D:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2ocpE (E:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpE (E:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2ocpF (F:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpF (F:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2ocpG (G:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpG (G:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2ocpH (H:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqaagnqkactaqslgnll
dmmyreparwsytfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlf
engslsdiewhiyqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgiel
ayleqlhgqheawlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvkn
l

    Sequence, based on observed residues (ATOM records): (download) 
    >2ocpH (H:)
gprrlsiegniavgkstfvklltktypewhvatepvatwqniqlgnlldmmyreparwsy
tfqtfsflsrlkvqlepfpekllqarkpvqifersvysdryifaknlfengslsdiewhi
yqdwhsfllwefasritlhgfiylqaspqvclkrlyqrareeekgielayleqlhgqhea
wlihkttklhfealmnipvlvldvnddfseevtkqedlmrevntfvknl