PDB entry 2oa8

View 2oa8 on RCSB PDB site
Description: Crystal Structure of mTREX1 with ssDNA
Class: hydrolase/DNA
Keywords: poly-proline helix, ssDNA complex, DnaQ family, HYDROLASE-DNA COMPLEX
Deposited on 2006-12-15, released 2007-02-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.195
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Three prime repair exonuclease 1
    Species: Mus musculus [TaxId:10090]
    Gene: Trex1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91XB0 (1-230)
      • modified residue (7)
      • modified residue (228)
      • cloning artifact (231)
    Domains in SCOPe 2.08: d2oa8a2, d2oa8a3
  • Chain 'B':
    Compound: Three prime repair exonuclease 1
    Species: Mus musculus [TaxId:10090]
    Gene: Trex1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91XB0 (1-230)
      • cloning artifact (0)
      • modified residue (7)
      • modified residue (228)
      • cloning artifact (231-232)
    Domains in SCOPe 2.08: d2oa8b2, d2oa8b3, d2oa8b4
  • Chain 'C':
    Compound: 5'-d(*gp*ap*cp*g)-3'
  • Chain 'D':
    Compound: 5'-d(*gp*ap*cp*g)-3'
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2oa8A (A:)
qtlphghmqtlifldleatglpssrpevtelcllavhrralentsisqghpppvprpprv
vdklslciapgkacspgaseitglskaelevqgrqrfddnlaillraflqrqpqpcclva
hngdrydfpllqtelarlstpspldgtfcvdsiaalkaleqasspsgngsrksyslgsiy
trlywqaptdshtaegdvltllsicqwkpqallqwvdeharpfstvkpmygta

    Sequence, based on observed residues (ATOM records): (download) 
    >2oa8A (A:)
tlphghmqtlifldleatglpssrpevtelcllavhrralentqghpppvprpprvvdkl
slciapgkacspgaseitglskaelevqgrqrfddnlaillraflqrqpqpcclvahngd
rydfpllqtelarlstpspldgtfcvdsiaalkaleqasksyslgsiytrlywqaptdsh
taegdvltllsicqwkpqallqwvdeharpfstvkpmygt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2oa8B (B:)
qtlphghmqtlifldleatglpssrpevtelcllavhrralentsisqghpppvprpprv
vdklslciapgkacspgaseitglskaelevqgrqrfddnlaillraflqrqpqpcclva
hngdrydfpllqtelarlstpspldgtfcvdsiaalkaleqasspsgngsrksyslgsiy
trlywqaptdshtaegdvltllsicqwkpqallqwvdeharpfstvkpmygta

    Sequence, based on observed residues (ATOM records): (download) 
    >2oa8B (B:)
qtlphghmqtlifldleatglpssrpevtelcllavhrralentsisqghpppvprpprv
vdklslciapgkacspgaseitglskaelevqgrqrfddnlaillraflqrqpqpcclva
hngdrydfpllqtelarlstpspldgtfcvdsiaalkaleqasrksyslgsiytrlywqa
ptdshtaegdvltllsicqwkpqallqwvdeharpfstvkpmygta

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.