PDB entry 2o7d

View 2o7d on RCSB PDB site
Description: Tyrosine ammonia-lyase from Rhodobacter sphaeroides, complexed with caffeate
Deposited on 2006-12-10, released 2007-01-16
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.175
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'B':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'C':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'D':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'E':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'F':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'G':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Chain 'H':
    Compound: Putative histidine ammonia-lyase
    Species: Rhodobacter sphaeroides [TaxId:1063]
    Gene: HUTH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3IWB0 (Start-522)
      • see remark 999 (148)
  • Heterogens: DHC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2o7dA (A:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dA (A:)
pkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgf
gplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegti
arlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrg
rlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaa
alsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcap
qvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatav
tvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasi
hsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspag
kklvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2o7dB (B:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dB (B:)
pkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgf
gplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegti
arlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrg
rlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaa
alsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcap
qvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatav
tvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasi
hsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspag
kklvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2o7dC (C:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dC (C:)
kpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgfg
planrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegtia
rlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrgr
lqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaaa
lsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcapq
vlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatavt
vlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasih
sistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspagk
klvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2o7dD (D:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dD (D:)
kpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgfg
planrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegtia
rlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrgr
lqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaaa
lsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcapq
vlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatavt
vlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasih
sistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspagk
klvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2o7dE (E:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dE (E:)
kpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgfg
planrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegtia
rlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrgr
lqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaaa
lsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcapq
vlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatavt
vlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasih
sistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspagk
klvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2o7dF (F:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dF (F:)
kpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgfg
planrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegtia
rlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrgr
lqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaaa
lsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcapq
vlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatavt
vlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasih
sistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspagk
klvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2o7dG (G:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dG (G:)
kpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgfg
planrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegtia
rlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrgr
lqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaaa
lsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcapq
vlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatavt
vlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasih
sistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspagk
klvqalreqfppletdrplgqeiaalathllqqspv

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2o7dH (H:)
mlamsppkpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvy
glttgfgplanrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasg
asegtiarlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldga
eglrrgrlqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgr
teawaaalsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqday
slrcapqvlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsd
alatavtvlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemra
tgpasihsistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgld
gvspagkklvqalreqfppletdrplgqeiaalathllqqspv

    Sequence, based on observed residues (ATOM records):
    >2o7dH (H:)
kpaveldrhidldqahavasggarivlappardrcrasearlgavirearhvyglttgfg
planrlisgenvrtlqanlvhhlasgvgpvldwttaramvlarlvsiaqgasgasegtia
rlidllnselapavpsrgtvgasgdltplahmvlclqgrgdfldrdgtrldgaeglrrgr
lqpldlshrdalalvngtsamtgialvnahacrhlgnwavaltallaeclrgrteawaaa
lsdlrphpgqkdaaarlrarvdgsarvvrhviaerrldagdigtepeagqdayslrcapq
vlgagfdtlawhdrvltielnavtdnpvfppdgsvpalhggnfmgqhvaltsdalatavt
vlaglaerqiarltderlnrglppflhrgpaglnsgfmgaqvtatallaemratgpasih
sistnaanqdvvslgtiaarlcrekidrwaeilailalclaqaaelrcgsgldgvspagk
klvqalreqfppletdrplgqeiaalathllqqspv