PDB entry 2o5r

View 2o5r on RCSB PDB site
Description: Crystal structure of Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate-tRNA ligase 1) (GluRS 1) (TM1351) from Thermotoga maritima at 2.5 A resolution
Class: ligase
Keywords: TM1351, Glutamyl-tRNA synthetase 1, EC 6.1.1.17, Glutamate-tRNA ligase 1, GluRS 1, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, LIGASE
Deposited on 2006-12-06, released 2006-12-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.34 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamyl-tRNA synthetase 1
    Species: Thermotoga maritima [TaxId:2336]
    Gene: gltX1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X172 (12-End)
      • modified residue (12)
      • modified residue (68)
      • modified residue (126)
      • modified residue (143)
      • modified residue (169)
      • modified residue (197)
      • modified residue (214)
      • modified residue (216)
      • modified residue (277)
      • modified residue (331)
      • modified residue (339)
      • modified residue (402)
      • modified residue (420)
      • modified residue (443)
    Domains in SCOPe 2.08: d2o5ra1, d2o5ra2
  • Heterogens: CL, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2o5rA (A:)
mgsdkihhhhhhmvrvrfapsptgflhvggartalfnflfarkekgkfilriedtdlers
ereyeeklmeslrwlgllwdegpdvggdhgpyrqserveiyrehaerlvkegkayyvyay
peeieemrekllsegkaphysqemfekfdtperrreyeekglrpavffkmprkdyvlndv
vkgevvfktgaigdfvimrsnglptynfacvvddmlmeithvirgddhlsntlrqlalye
afekappvfahvstilgpdgkklskrhgatsveafrdmgylpealvnylallgwshpegk
elltleelissfsldrlspnpaifdpqklkwmngyylrnmpieklaelakpffekagiki
ideeyfkkvleitkervevlsefpeesrfffedpapveipeemkevfsqlkeelqnvrwt
meeitpvfkkvlkqhgvkpkefymtlrrvltgreegpelvniipllgkeiflrrierslg
g

    Sequence, based on observed residues (ATOM records): (download) 
    >2o5rA (A:)
mvrvrfapsptgflhvggartalfnflfarkekgkfilriedtdlersereyeeklmesl
rwlgllwdegpdvggdhgpyrqserveiyrehaerlvkegkayyvyaypeeieemrekll
segkaphysqemfekfdtperrreyeekglrpavffkmprkdyvlndvvkgevvfktgai
gdfvimrsnglptynfacvvddmlmeithvirgddhlsntlrqlalyeafekappvfahv
stilgpdgkklskrhgatsveafrdmgylpealvnylallgwshpegkelltleelissf
sldrlspnpaifdpqklkwmngyylrnmpieklaelakpffekagikiideeyfkkvlei
tkervevlsefpeesrfffedpapveipeemkevfsqlkeelqnvrwtmeeitpvfkkvl
kqhgvkpkefymtlrrvltgreegpelvniipllgkeiflrrierslg