PDB entry 2nwb

View 2nwb on RCSB PDB site
Description: Crystal Structure of a Putative 2,3-dioxygenase (SO4414) from Shewanella oneidensis in complex with ferric heme. Northeast Structural Genomics Target SoR52.
Class: oxidoreductase
Keywords: Dioxygenase, Heme-binding protein, Hemoprotein, all alpha-helical protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, OXIDOREDUCTASE
Deposited on 2006-11-14, released 2006-12-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.217
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: conserved domain protein
    Species: Shewanella oneidensis [TaxId:211586]
    Gene: SO_4414
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8E972 (Start-391)
      • cloning artifact (392-395)
    Domains in SCOPe 2.06: d2nwba1, d2nwba2
  • Chain 'B':
    Compound: conserved domain protein
    Species: Shewanella oneidensis [TaxId:211586]
    Gene: SO_4414
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8E972 (Start-391)
      • cloning artifact (392-393)
    Domains in SCOPe 2.06: d2nwbb1, d2nwbb2
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2nwbA (A:)
mkpatynteafdewirsrfvelnsqleqlyyqqtdranvqevgtelkhtlesegrelvka
lldegntdegfdsafdllgnvglymaacrrheiteptrettsplleasalamhigasigv
tprfatahltthnrahngiykrftdlpdeklfvdyntkgilaykrasdallkiqplgish
pishdllrvtkqalqdviesnqqlfnrldtdrffycvrpyykpyrvgsvvyrganagdfa
ginvidltlglcfaneasysqmlvdkflymmpedqqilrecmrrpnlmddflqakgcihq
dwyqenlklfievcelhgqtaiqhhnelvtkyiaepsvsmeqqhlakvtasgpplhvlla
slerlrdrraavlrddirtryydlkklkdslrlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2nwbA (A:)
tynteafdewirsrfvelnsqleqlyyqqtdranvqevgtelkhtlesegrelvkallde
gntdegfdsafdllgnvglymaacrrheiteptrettsplleasalamhigasigvtprf
atahltthnrahngiykrftdlpdeklfvdyntkgilaykrasdallkiqplgishpish
dllrvtkqalqdviesnqqlfnrldtdrffycvrpyykpyrvgsvvyrganagdfaginv
idltlglcfaneasysqmlvdkflymmpedqqilrecmrrpnlmddflqakgcihqdwyq
enlklfievcelhgqtaiqhhnelvtkyiaepsvsmplhvllaslerlrdrraavlrddi
rtryydlkklkdslrlehh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2nwbB (B:)
mkpatynteafdewirsrfvelnsqleqlyyqqtdranvqevgtelkhtlesegrelvka
lldegntdegfdsafdllgnvglymaacrrheiteptrettsplleasalamhigasigv
tprfatahltthnrahngiykrftdlpdeklfvdyntkgilaykrasdallkiqplgish
pishdllrvtkqalqdviesnqqlfnrldtdrffycvrpyykpyrvgsvvyrganagdfa
ginvidltlglcfaneasysqmlvdkflymmpedqqilrecmrrpnlmddflqakgcihq
dwyqenlklfievcelhgqtaiqhhnelvtkyiaepsvsmeqqhlakvtasgpplhvlla
slerlrdrraavlrddirtryydlkklkdslrlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2nwbB (B:)
ynteafdewirsrfvelnsqleqlyyqqtdranvqevgtelkhtlesegrelvkalldeg
ntdegfdsafdllgnvglymaacrrheiteptrettsplleasalamhigasigvtprfa
tahltthnrahngiykrftdlpdeklfvdyntkgilaykrasdallkiqplgishpishd
llrvtkqalqdviesnqqlfnrldtdrffycvrpyykpyrvgsvvyrganagdfaginvi
dltlglcfaneasysqmlvdkflymmpedqqilrecmrrpnlmddflqakgcihqdwyqe
nlklfievcelhgqtaiqhhnelvtkyvllaslerlrdrraavlrddirtryydlkklkd
slrle