PDB entry 2nvr

View 2nvr on RCSB PDB site
Description: Catalytic domain of human histone deacetylase HDAC7
Class: hydrolase
Keywords: histone deacetylase, structural genomics, structural genomics consortium, sgc
Deposited on 2006-11-13, released 2006-12-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-02-19, with a file datestamp of 2008-02-15.
Experiment type: XRAY
Resolution: 1.99 Å
R-factor: 0.187
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone deacetylase 7a
    Species: HOMO SAPIENS
    Gene: HDAC7A, HDAC7
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Histone deacetylase 7a
    Species: HOMO SAPIENS
    Gene: HDAC7A, HDAC7
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2nvrb_
  • Chain 'C':
    Compound: Histone deacetylase 7a
    Species: HOMO SAPIENS
    Gene: HDAC7A, HDAC7
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2nvrc_
  • Heterogens: ZN, K, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2nvrB (B:)
    gsraqsspaapaslsapepasqarvlsssetpartlpfttgliydsvmlkhqcscgdnsr
    hpehagriqsiwsrlqerglrsqceclrgrkasleelqsvhserhvllygtnplsrlkld
    ngklagllaqrmfvmlpcggvgvdtdtiwnelhssnaarwaagsvtdlafkvasrelkng
    favvrppghhadhstamgfcffnsvaiacrqlqqqskaskilivdwdvhhgngtqqtfyq
    dpsvlyislhrhddgnffpgsgavdevgagsgegfnvnvawaggldppmgdpeylaafri
    vvmpiarefspdlvlvsagfdaaeghpaplggyhvsakcfgymtqqlmnlaggavvlale
    gghdltaicdaseacvaallgnrvdplseegwkqkpnlnairsleavirvhskywgcmqr
    las
    

    Sequence, based on observed residues (ATOM records): (download)
    >2nvrB (B:)
    pfttgliydsvmlkhqcscgdnsrhpehagriqsiwsrlqerglrsqceclrgrkaslee
    lqsvhserhvllygtnplsvmlpcggvgvdtdtiwnelhssnaarwaagsvtdlafkvas
    relkngfavvrppghhadhstamgfcffnsvaiacrqlqqqskaskilivdwdvhhgngt
    qqtfyqdpsvlyislhrhddgnffpgsgavdevgagsgegfnvnvawaggldppmgdpey
    laafrivvmpiarefspdlvlvsagfdaaeghpaplggyhvsakcfgymtqqlmnlagga
    vvlalegghdltaicdaseacvaallgnrvdplseegwkqkpnlnairsleavirvhsky
    wgcmqrl
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2nvrC (C:)
    gsraqsspaapaslsapepasqarvlsssetpartlpfttgliydsvmlkhqcscgdnsr
    hpehagriqsiwsrlqerglrsqceclrgrkasleelqsvhserhvllygtnplsrlkld
    ngklagllaqrmfvmlpcggvgvdtdtiwnelhssnaarwaagsvtdlafkvasrelkng
    favvrppghhadhstamgfcffnsvaiacrqlqqqskaskilivdwdvhhgngtqqtfyq
    dpsvlyislhrhddgnffpgsgavdevgagsgegfnvnvawaggldppmgdpeylaafri
    vvmpiarefspdlvlvsagfdaaeghpaplggyhvsakcfgymtqqlmnlaggavvlale
    gghdltaicdaseacvaallgnrvdplseegwkqkpnlnairsleavirvhskywgcmqr
    las
    

    Sequence, based on observed residues (ATOM records): (download)
    >2nvrC (C:)
    ttgliydsvmlkhqcscgdnsrhpehagriqsiwsrlqerglrsqceclrgrkasleelq
    svhserhvllygtnplpcggvgvdtdtiwnelhssnaarwaagsvtdlafkvasrelkng
    favvrppghhadhstamgfcffnsvaiacrqlqqqskaskilivdwdvhhgngtqqtfyq
    dpsvlyislhrhddgnffpgsgavdevgagsgegfnvnvawaggldppmgdpeylaafri
    vvmpiarefspdlvlvsagfdaaeghpaplggyhvsakcfgymtqqlmnlaggavvlale
    gghdltaicdaseacvaallgnrvdplseegwkqkpnlnairsleavirvhskywgcmq