PDB entry 2nug

View 2nug on RCSB PDB site
Description: Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 1.7-Angstrom Resolution
Class: hydrolase/RNA
Keywords: Ribonuclease III, dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA COMPLEX
Deposited on 2006-11-09, released 2007-11-20
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.194
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease III
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: rnc
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2nuga1, d2nuga2
  • Chain 'B':
    Compound: Ribonuclease III
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: rnc
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d2nugb1, d2nugb2
  • Chain 'C':
    Compound: 5'-r(p*ap*ap*gp*gp*up*cp*ap*up*up*cp*g)-3'
  • Chain 'D':
    Compound: 5'-r(p*ap*ap*gp*gp*up*cp*ap*up*up*cp*g)-3'
  • Chain 'E':
    Compound: 5'-r(p*ap*gp*up*gp*gp*cp*cp*up*up*gp*c)-3'
  • Chain 'F':
    Compound: 5'-r(p*ap*gp*up*gp*gp*cp*cp*up*up*gp*c)-3'
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2nugA (A:)
mkmleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqysp
nkregflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyids
grdanftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphh
kkkfiveakikeyrtlgegkskkeaeqraaeeliklleese

    Sequence, based on observed residues (ATOM records): (download) 
    >2nugA (A:)
mleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqyspnk
regflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyidsgr
danftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphhkk
kfiveakikeyrtlgegkskkeaeqraaeeliklle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2nugB (B:)
mkmleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqysp
nkregflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyids
grdanftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphh
kkkfiveakikeyrtlgegkskkeaeqraaeeliklleese

    Sequence, based on observed residues (ATOM records): (download) 
    >2nugB (B:)
mleqlekklgytfkdksllekalthvsyskkehyetleflgdalvnffivdllvqyspnk
regflsplkayliseeffnllaqklelhkfirikrgkinetiigdvfealwaavyidsgr
danftrelfyklfkedilsaikegrvkkdyktilqeitqkrwkerpeyrlisvegphhkk
kfiveakikeyrtlgegkskkeaeqraaeelikllees

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.