PDB entry 2np5
View 2np5 on RCSB PDB site
Description: Crystal structure of a transcriptional regulator (RHA1_ro04179) from Rhodococcus sp. Rha1.
Class: transcription
Keywords: tetR family, transcriptional regulator, structural genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, TRANSCRIPTION
Deposited on
2006-10-26, released
2006-11-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.179
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Transcriptional regulator
Species: Rhodococcus sp. [TaxId:101510]
Gene: RHA1_ro04179
Database cross-references and differences (RAF-indexed):
- Uniprot Q0S914
- modified residue (55)
- modified residue (88)
- modified residue (105)
Domains in SCOPe 2.08: d2np5a1, d2np5a2 - Chain 'B':
Compound: Transcriptional regulator
Species: Rhodococcus sp. [TaxId:101510]
Gene: RHA1_ro04179
Database cross-references and differences (RAF-indexed):
- Uniprot Q0S914
- modified residue (55)
- modified residue (88)
- modified residue (105)
Domains in SCOPe 2.08: d2np5b1, d2np5b2 - Chain 'C':
Compound: Transcriptional regulator
Species: Rhodococcus sp. [TaxId:101510]
Gene: RHA1_ro04179
Database cross-references and differences (RAF-indexed):
- Uniprot Q0S914
- modified residue (55)
- modified residue (88)
- modified residue (105)
Domains in SCOPe 2.08: d2np5c1, d2np5c2 - Chain 'D':
Compound: Transcriptional regulator
Species: Rhodococcus sp. [TaxId:101510]
Gene: RHA1_ro04179
Database cross-references and differences (RAF-indexed):
- Uniprot Q0S914
- modified residue (55)
- modified residue (88)
- modified residue (105)
Domains in SCOPe 2.08: d2np5d1, d2np5d2 - Heterogens: LMT, NDS, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2np5A (A:)
mrerrysstsperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafa
lrtlvdkllarlseverggdparalfaamsqllpldearsreahvmaafavraatspsla
eirrktlftirtglsavligigtpeaetraalllatvdglaldaigspalyppeylehal
diqigmilqgadvvpsssielas
Sequence, based on observed residues (ATOM records): (download)
>2np5A (A:)
tsperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafalrtlvdkl
larlseverggdparalfaamsqllpldearsreahvmaafavraatspslaeirrktlf
tirtglsavligigtpeaetraalllatvdglaldaigspalyppeylehaldiqigmil
qgadvvp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2np5B (B:)
mrerrysstsperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafa
lrtlvdkllarlseverggdparalfaamsqllpldearsreahvmaafavraatspsla
eirrktlftirtglsavligigtpeaetraalllatvdglaldaigspalyppeylehal
diqigmilqgadvvpsssielas
Sequence, based on observed residues (ATOM records): (download)
>2np5B (B:)
tsperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafalrtlvdkl
larlseverggdparalfaamsqllpldearsreahvmaafavraatspslaeirrktlf
tirtglsavligigtpeaetraalllatvdglaldaigspalyppeylehaldiqigmil
qgadvvp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2np5C (C:)
mrerrysstsperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafa
lrtlvdkllarlseverggdparalfaamsqllpldearsreahvmaafavraatspsla
eirrktlftirtglsavligigtpeaetraalllatvdglaldaigspalyppeylehal
diqigmilqgadvvpsssielas
Sequence, based on observed residues (ATOM records): (download)
>2np5C (C:)
sperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafalrtlvdkll
arlseverggdparalfaamsqllpldearsreahvmaafavraatspslaeirrktlft
irtglsavligigtpeaetraalllatvdglaldaigspalyppeylehaldiqigmilq
gadv
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2np5D (D:)
mrerrysstsperlaaalfdvaaesglegasvrevakragvsigavqhhfstkdemfafa
lrtlvdkllarlseverggdparalfaamsqllpldearsreahvmaafavraatspsla
eirrktlftirtglsavligigtpeaetraalllatvdglaldaigspalyppeylehal
diqigmilqgadvvpsssielas
Sequence, based on observed residues (ATOM records): (download)
>2np5D (D:)
sperlaaalfdvaaesglkdemfafalrtlvdkllarlseverggdparalfaamsqllp
ldearsreahvmaafavraatspslaeirrktlftirtglsavligigtpeaetraalll
atvdglaldaigspalyppeylehaldiqigmilqgad