PDB entry 2nny

View 2nny on RCSB PDB site
Description: Crystal structure of the Ets1 dimer DNA complex.
Class: Transcription/DNA
Keywords: ETS-1, PROTEIN-DNA COMPLEX, Transcription/DNA COMPLEX
Deposited on 2006-10-24, released 2008-03-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.58 Å
R-factor: 0.235
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: c-ets-1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: Ets1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14921
      • engineered (79)
      • engineered (145)
    Domains in SCOPe 2.08: d2nnya_
  • Chain 'B':
    Compound: c-ets-1 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: Ets1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14921
      • engineered (79)
      • engineered (145)
    Domains in SCOPe 2.08: d2nnyb_
  • Chain 'C':
    Compound: 5'-d(*t*ap*gp*ap*cp*ap*gp*gp*ap*ap*gp*cp*ap*cp*tp*tp*cp*cp*tp*gp*gp*ap*g)-3'
  • Chain 'D':
    Compound: 5'-d(*a*cp*tp*cp*cp*ap*gp*gp*ap*ap*gp*tp*gp*cp*tp*tp*cp*cp*tp*gp*tp*cp*t)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2nnyA (A:)
mkhhhhhpmvpsydsfdsedypaalpnhkpkgtfkdyvrdradlnkdkpvipaaalagyt
gsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyekls
rglryyydkniihktagkryvyrfvsdlqsllgytpeelhamldvkpdade

    Sequence, based on observed residues (ATOM records): (download) 
    >2nnyA (A:)
vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsd
pdevarrwgkrknkpkmnyeklsrglryyydkniihktagkryvyrfvsdlqsllgytpe
elhamldvk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2nnyB (B:)
mkhhhhhpmvpsydsfdsedypaalpnhkpkgtfkdyvrdradlnkdkpvipaaalagyt
gsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyekls
rglryyydkniihktagkryvyrfvsdlqsllgytpeelhamldvkpdade

    Sequence, based on observed residues (ATOM records): (download) 
    >2nnyB (B:)
vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsd
pdevarrwgkrknkpkmnyeklsrglryyydkniihktagkryvyrfvsdlqsllgytpe
elhamldvk

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.