PDB entry 2mf6

View 2mf6 on RCSB PDB site
Description: Solution NMR structure of Chimeric Avidin, ChiAVD(I117Y), in the biotin bound form
Class: biotin binding protein
Keywords: biotin binding protein
Deposited on 2013-10-07, released 2014-08-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2014-08-06, with a file datestamp of 2014-08-01.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Avidin, Avidin-related protein 4/5
    Species: Gallus gallus [TaxId:9031]
    Gene: AVD, AVR4, AVR5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02701 (3-39)
      • expression tag (0-2)
    • Uniprot P56734 (40-60)
    • Uniprot P02701 (61-128)
      • engineered mutation (117)
    Domains in SCOPe 2.07: d2mf6a1, d2mf6a2
  • Chain 'B':
    Compound: Avidin, Avidin-related protein 4/5
    Species: Gallus gallus [TaxId:9031]
    Gene: AVD, AVR4, AVR5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02701 (3-39)
      • expression tag (0-2)
    • Uniprot P56734 (40-60)
    • Uniprot P02701 (61-128)
      • engineered mutation (117)
    Domains in SCOPe 2.07: d2mf6b1, d2mf6b2
  • Chain 'C':
    Compound: Avidin, Avidin-related protein 4/5
    Species: Gallus gallus [TaxId:9031]
    Gene: AVD, AVR4, AVR5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02701 (3-39)
      • expression tag (0-2)
    • Uniprot P56734 (40-60)
    • Uniprot P02701 (61-128)
      • engineered mutation (117)
    Domains in SCOPe 2.07: d2mf6c1, d2mf6c2
  • Chain 'D':
    Compound: Avidin, Avidin-related protein 4/5
    Species: Gallus gallus [TaxId:9031]
    Gene: AVD, AVR4, AVR5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02701 (3-39)
      • expression tag (0-2)
    • Uniprot P56734 (40-60)
    • Uniprot P02701 (61-128)
      • engineered mutation (117)
    Domains in SCOPe 2.07: d2mf6d1, d2mf6d2

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2mf6A (A:)
    qtvarkcsltgkwtndlgsnmtigavnsrgeftgtyitavadnpgnitlspllgiqhkra
    sqptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvgyni
    ftrlrtqke
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2mf6B (B:)
    qtvarkcsltgkwtndlgsnmtigavnsrgeftgtyitavadnpgnitlspllgiqhkra
    sqptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvgyni
    ftrlrtqke
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2mf6C (C:)
    qtvarkcsltgkwtndlgsnmtigavnsrgeftgtyitavadnpgnitlspllgiqhkra
    sqptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvgyni
    ftrlrtqke
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2mf6D (D:)
    qtvarkcsltgkwtndlgsnmtigavnsrgeftgtyitavadnpgnitlspllgiqhkra
    sqptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvgyni
    ftrlrtqke